Salvelinus sp. IW2-2015 (Arctic char): 112074477
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Entry
112074477 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase rnf213-alpha-like
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112074477
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112074477
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112074477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_22
AAA_5
AAA_7
ABC_tran
MCM
DZR
Ribosomal_L37e
Zn_ribbon_NOB1
TSP1_CFP_C
FHIPEP
zf-ChsH2
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
112074477
NCBI-ProteinID:
XP_023997413
LinkDB
All DBs
Position
Unknown
AA seq
2392 aa
AA seq
DB search
MKLQMKCTGCGHVAFEKTARFCSQCGHQLSAQPVTKEPGSSKKAADAKTADQEAPKAADA
KTADQEAPKAADAKTAVQKAPKTADAKTAVQKAPKAADAKSTKNKKDVANSKQTNLDQNA
NQNAKQNQTRQDKQKGTDDQQNQDSKQTTAGNKMVLGSQKKSEVIRGDWHQYDDIICVEP
SKNVLKRLKDALWPEQRKSVIEGREIAGKIMLESIFDLLRSWTDINLKSFLSQLNQFYQI
YGNPSVYEETHKKWCSLDYDEKDLDHGESTRLCTALCLPKLPKDSFLQYWTDFAQAVSGL
KNLPDMLVALINSVKTEGPRWILVLPLLHLLKGSSKPFTPISTTVTTKYEQSWAGLQGLK
AGNMALNSQERRAMLNLMKNNGHLVEMDRLVSRSWMCLLTIEDLMECSVIINVELLDLLH
VFTLRAPQDVTYSNKQYVSDTLSHIQSNLIEEKYSCFSESYGRDCLATAVKLLEKICKGV
RSTSTYTQNFKDIPVACMNMVVSVSEFARAFEKQATKDVEREHMHAKELDLLSEAMVIVR
SWIGKTFRSKSEGKLLDRLKXNWKFGKLISAIIQKSWPRNERGDYHEDDDVVFQHLLSWT
AAKNIFQLHGADEKLIEQLSEEARDRMAVAISMAVAISSFTAISNQLVHGNIRIKLLNSV
LEKRXTFTELLKIDCLSENERYKDXRPMKRLLMCRQEEVKAVYHEKELVEVLLTMSRKLQ
EHVVVQFEGLEARLQTNIEAMTLDQFMGVHPFDQLSSPTPDYFVGPVEIHSDIFLPCYAK
YDKIYKCLKNGSLRLEEVDTLFKAYRGKYEELAQDFDIMCRNDNRIXQTVIQRRVQQIEQ
YHELHLAVEXAQVIMLVKQTLNLQGNFQVLQTLLEVTHEDFKREHLDRIDNDLMQTKLVL
VDITEPRRLCLQELGLRKNFVIWVKEALEDINELKVFVDLASXSAGENDLDVDRVACFHD
AVLGYSPMLYELKPDSGFQAFKEVLKKLWRALSNDNNLPKKLRDTARHLEWLKTVKDSHG
SVELSSLSLASAINSKGIYIISAQNQKKLSLDTALKLQIPEEHDEGHEMRRYSLEDLREL
QNKLMLMSGKGDQGQCEVDQFAEVFASVQRLAVAFIALFTAGNPLFRHWEANINCSSLSQ
DAGIIMDFNLGSIVSVIMVDGSIVEQLPELCRKMEKCLKYWNDFMDKQRSHXYYLNYYTA
EQILYLCSKLTQQNVSNLEEQVLMMLSFVKPNCTASDLRQTWHTLQYEILTNPPVQNEDV
DFQTFVEVPSGVQGGLDFIGELNFSSDNLPSLVEHISGSGKLDLMWNAYMRDMKCFLPDT
LDVRSFGRLLEILANISDENEGDMTDEKKYKSIERLMPKGLXIGSPNLIVSPHDEILTSC
ISIYMSSKHEPLPTYDEVLLCNSSTPYEQVELFLRRCLTAGYRGEKIYTMLYGDQLSYEV
SSKVESFFQNXNAEQEDYRLVIICSSDREHAYLPCAFSQYRLHMVPQEPXSSIQRYLKTN
TTPVPSDQSSAAAVFKDRMFVGVVSSSRAGVGKSLYIKRLYEKLKHSTKKPSLLKCIRLI
EPRVDENVIFSLLLNTPKSKESSSTSMSHLQCKCQLPFLDVFPNVFCRPPKEVLDXEMRM
LEDPSVXKVEDPFMDDKEFRSEAYQRPYQYLTVSHNQIDLDTFMYNGVEGTYVECLQMPL
CLWHNGPSWAELRNFAWFLNLQLRDCETSVFCDASFTXDTLQGFKNFVVDFNDLMAKDFA
TPSSSISDQSPGRQQMDLTGVSRQDLAPFRIRKRWESEPHPYIFLNDDHVSMTFIGXHLQ
PTNRTLLSAIDPSTRRVIKRDIMTRELYEGLKLQRVPFNIDFDQLPRGEKIERLCNVLGI
QWPLDPDETYELTTDNILKMLAIHMRFRCGIPVIIMGETGCGKTRLIKFLCELRRSGVAT
ENMKLVKVHGGTSSDMIYTKIREAEAIAVTNKQEYGFDSVLFFDEANTTEAISSIKEVLC
DNTVEGECLVPHCGLQIIAACNPYRKHTDEMIQRLESAGLGYRVRAEETDEKLGSIPLRQ
LVYRVQALPPSMIPLVWDFGQLNDHTEKMYIQQIVQRVVETNTIDIVYTRLIAEVLSASQ
XYMRTRKDECSFVSLRDVERCMQAFVWFYKNHAMLLAELNQYQRNQNAERSERNQREPEA
RDPVLWSVVMALGVCYHACLENKDKYRQRICKYLTETYTPLKVMQEISLMQDLLLSGVPL
GETIARNNALKENVFMMVVCIELRIPLFLVGKPGSSKSLSKTLVADAMQGQAAHSDLYKR
LKQIHLVSFQCSPHSTPEGIINTFKQCGRFQEGKNLKEYISVVVLDEIGLAEDSPKMPLK
TLHPLLEEGCIDDEPLPHKKVGFIGISNWALDPAKMNRGIFVSRGDPDEKEL
NT seq
7177 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcagatgaagtgcacaggttgtggccatgttgcgtttgagaaaacggctaga
ttctgcagccagtgtggccatcagctatctgcacaaccagtcaccaaggagcctggaagc
tccaaaaaggctgctgacgcgaagaccgctgaccaggaagctccaaaggctgctgacgcg
aagaccgctgaccaggaagctccaaaggctgctgacgcgaagaccgctgtccagaaagct
ccaaagaccgctgacgcaaagaccgctgtccagaaagctccaaaggctgctgacgcgaag
agcactaagaacaagaaagacgtggccaactcaaagcagacgaacctggaccagaatgcg
aaccagaatgctaagcagaaccagaccagacaggacaaacagaaagggacagatgatcag
cagaaccaggactcgaagcaaaccaccgctggaaataagatggtgttaggctctcagaag
aaatcagaggtaatacgaggggactggcatcagtatgatgacatcatatgtgtggagcca
tccaagaacgtgctcaagcggctaaaagatgctctttggcccgaacaaaggaaaagtgtc
atcgaaggccgagaaatcgcagggaagattatgctagagagcatatttgacctcctcagg
agctggactgacattaacctcaagagtttcctcagtcaactgaatcagttttaccagatc
tacgggaacccgtctgtctatgaggagacacacaagaaatggtgctccttagactacgac
gaaaaagatctggaccacggagagtccacccggctctgcaccgccctgtgcttgcccaag
ctgcccaaagactccttcctgcagtactggaccgacttcgcccaagccgtctccggtctc
aaaaacttgccagacatgttggtggctctgatcaacagtgtgaagactgaagggccccgg
tggattttggtgctccccctgctccacctcctcaagggatcctccaaaccgttcacaccc
atatctaccactgtcaccaccaagtacgagcagtcctgggcgggcctccaaggcctcaaa
gcaggcaacatggcactcaacagccaggagaggagagcgatgttgaatctcatgaaaaac
aatggccatctggttgagatggacagactagtgtctcggtcctggatgtgtctgctgacc
atagaggacctgatggaatgcagcgtcatcatcaacgtggaactgctggacctgctccat
gtcttcactctgagggcccctcaagatgtcacctatagcaacaagcagtatgtgtcagac
actctctcacatattcaaagcaatctcatcgaggagaaatacagttgttttagtgagtcg
tatggcagagactgcttggcaacagcagtgaaattgcttgagaagatctgcaaaggagtc
cggtccacttcaacctacactcagaacttcaaagacatccctgtggcatgcatgaacatg
gttgtctctgtatctgagtttgcccgggcctttgagaaacaggcaactaaggatgtggaa
agagagcatatgcatgccaaggagctggatctgctatccgaggcgatggtgatcgtcaga
tcctggatcggcaaaaccttcagaagcaagtctgagggtaaactcttrgaccggttgaag
atkaactggaagtttggraaactcatctcagccatcatccagaagtcctggccgagaaac
gagcgtggtgattaccacgaagacgacgacgtggtctttcaacacctgctctcctggaca
gccgccaagaacatcttccagctacacggtgcagatgaaaagctgattgagcagctctct
gaagaagccagggacaggatggccgtagctatctcgatggccgtagctatctcgtccttc
actgccatctccaaccagctggtccacggaaacatccggatcaaactgctcaactccgtc
ttggagaagaggnataccttcacagagctgctgaaaatagactgtctttcggagaatgag
cgctacaaggacnagcgccccatgaaaaggctgctaatgtgtaggcaggaggaggtgaaa
gctgtctaccatgagaaggagctggtggaagtcctgcttactatgagccgcaaactacag
gaacatgtcgtagttcaatttgaaggcttggaagcaagactacagaccaacattgaagca
atgacccttgaccaattcatgggggtccatccattcgatcaactgtcttctccaacgccg
gactactttgtaggaccagtcgagatacacagcgatatttttcttccttgctacgcgaag
tacgataagatctacaaatgcctgaagaacggcagccttcggctcgaagaggtcgatact
ctcttcaaggcctacaggggcaagtacgaagagctggcgcaggactttgatatcatgtgc
agaaacgacaatcggatannacaaacagtgatccagagaagggtgcagcagattgagcag
taccacgagcttcacctggctgtggagnttgctcaggtcatcatgttggtcaagcagacg
ctcaaccttcaaggcaacttccaagtcctgcagacactgctagaagttacgcatgaggac
tttaagagggagcacctggatcgtattgacaatgacctgatgcagacaaagctggttctg
gtggacattacagagccccgcagactgtgtctccaggagctcggcctcaggaaaaacttt
gttatctgggttaaagaggctcttgaagatatcaacgagcttaaagtgtttgttgacctg
gcttccnattctgctggggagaatgacctcgacgtggaccgtgtggcctgtttccatgat
gctgtcctgggttactctccgatgctgtacgaactgaagccagactccggtttccaggcc
ttcaaggaggtgctgaaaaagctgtggagggcattgagtaatgacaacaacctcccaaag
aagctacgtgacacagcgcgccacctggagtggttgaagactgtgaaggacagccatgga
tctgtggaactatcctctctctccttagcatcagccatcaacagtaaaggaatctacatc
atcagtgcccagaaccaaaagaagttgagcctggacacggccctgaaactgcagatccca
gaggagcacgacgagggccatgagatgcgccgttactccctggaggacctgagggaactg
cagaacaaactcatgctcatgtctgggaaaggcgaccagggccagtgtgaggtggaccag
tttgcagaggttttcgccagtgtccagaggctagctgtggcattcattgccctgttcacg
gcagggaaccccctgttcagacactgggaggccaacatcaactgtagttccctcagccaa
gacgccggcatcatcatggacttcaaccttggcagcattgtcagtgtgattatggtggat
ggcagcatcgtggagcagcttcctgagctgtgcaggaagatggagaagtgtctgaagtac
tggaacgacttcatggacaaacagagatcccacwattactacctgaactactacactgcc
gagcagatcytatacctgtgcagtaagctgactcagcagaatgtgtcgaatttggaggaa
caagttctcatgatgctctcctttgtcaaacccaactgcacagcttccgatcttaggcaa
acctggcacacactacaatacgagatcctcactaacccacctgtgcaaaatgaggacgtt
gacttccagacttttgttgaggtgccgagcggtgtacagggaggtctggatttcattgga
gagttgaatttctcttcagacaatcttccaagtcttgtggagcacattagcggctcagga
aagttggacttgatgtggaacgcctacatgagagacatgaagtgtttcctcccagacact
ctcgacgtccgaagctttggaagactgctagaaattctggccaacataagtgatgagaat
gaaggagacatgactgatgagaagaaatacaaaagcattgaaagattgatgcccaagggc
ctggrtatcggaagtccaaacctcatagtttccccacacgacgagatcctgacgtcttgc
atctccatttacatgagcagcaaacacgagccgctgcccacatacgacgaggtcctattg
tgcaactcctccacaccttacgagcaggtggagctgttcctcagacgctgcctcactgcc
ggctacagaggagagaagatttacaccatgctctacggcgatcagttgagctacgaagtc
agctccaaggtggagagctttttccagaattaaaatgcagagcaggaggactacaggctc
gtgatcatctgcagctcggacagagagcatgcctaccttccctgcgccttcagccagtac
aggttacacatggtgccccaggaacccntgagcagcatccagagatacctcaaaacaaac
actacaccggtcccgtcagatcagagcagtgctgctgctgtgttcaaggacagaatgttt
gttggagttgtgtcgtccagtagagctggagttggtaagtccctttacatcaagaggctg
tatgaaaaactgaaacactccaccaagaagccgtcactgctgaaatgcatccgcttgatc
gagccaagggttgatgagaatgttattttcagtctcctgctgaatacccccaagtcgaaa
gagtcatcttccacttcgatgtcacatcttcaatgcaagtgccaactcccattcctggat
gtgttcccaaatgtcttctgccgcccaccaaaagaggttctagatnctgaaatgaggatg
ctggaggacccctccgttngtaaagttgaagacccattcatggatgacaaagagttcagg
agtgaagcataccaacgaccctaccagtatctgacggtttcccataatcaaatcgacctg
gacaccttcatgtacaatggggtggaaggcacctatgtagaatgtctacagatgccttta
tgtctgtggcataatggcccatcgtgggccgagttaaggaattttgcatggttcctaaac
cttcaactacgagactgtgagacgtcagtcttttgtgatgcctctttcaccngggacacc
ctccagggattcaagaactttgtggtggacttcaatgatctgatggccaaggactttgcc
acaccgtcctccagcatctctgaccagagccccgggaggcagcaaatggacctgactggg
gtcagccgacaagacttggcacccttccggatcaggaagcgatgggagtcagaaccacat
ccgtacatcttcctcaacgatgaccatgtgtccatgaccttcattggcnctcatcttcag
ccaacgaacagaactctgttgagtgccatcgatccatccacaagaagggtgatcaaaaga
gacatcatgaccagagagctgtatgagggtctaaagctacagagagtccctttcaatatc
gactttgaccaactgcccagaggggagaagattgaacgcctttgcaacgtcttgggaatc
cagtggcctcttgatcctgacgaaacgtatgagctcaccactgacaatatactgaagatg
ctrgccatccacatgcggttcaggtgtggcatcccagtcatcatcatgggggagacaggc
tgtgggaagacaaggctcattaaattcctatgtgagcttaggaggagcggagtggccacg
gagaacatgaagctagtcaaagttcatggtggaaccagctcagacatgatctacaccaaa
atccgggaagcagaagccattgcggtcaccaacaaacaagaatacggctttgactctgtc
ctcttctttgacgaagccaacaccacggaagccatcagcagtatcaaggaagtcctctgt
gataatacagtggagggagagtgtttggtgccccattgcggcttgcagatcatcgccgca
tgcaacccttacagaaaacacactgacgagatgattcagaggttggagtctgctggactg
ggatatcgagtccgagctgaagagactgatgagaagctgggctccatccctctccgccag
ttggtgtacagagtccaggccttgccccccagcatgatacctctggtgtgggactttggc
cagctcaatgatcacactgaaaaaatgtacatccagcagattgtccagagrgtggttgag
accaacacgatcgatatagtatacaccaggttgatcgcggaagtcctgtctgcttcgcag
akgtacatgcggacgaggaaagacgaatgtagcttcgtaagtctgagggatgtagaacgt
tgcatgcaagcctttgtgtggttctacaaaaaccatgcsatgctgcttgcwgagctaaat
cagtatcagagaaatcaaaacgcagagaggagtgagaggaaccagagggagccagaagca
agagacccagtcttgtggtctgtagtgatggctctgggagtatgctaccatgcctgcttg
gaaaacaaggacaagtacagacagagaatctgcaaatacctcactgaaacctacacccct
ttgaaagtgatgcaggagatctccctcatgcaggatctccttctgagcggagtgcccttg
ggggaaactattgcacgaaacaacgctctgaaagagaatgtcttcatgatggtggtctgt
atagagctgagaatccccctcttcttggtggggaaacctgggagttcaaaatctctrtct
aaaaccttggtggcagacgccatgcagggccaagccgcacactctgacctctacaaaagg
cttaagcagattcacctggtgtccttccagtgcagccctcactccacaccggagggcatc
atcaacacgttcaagcaatgtggtcgcttccaggaggggaagaacctgaaggagtatata
tctgtggtggtgctggatgagattggcttggctgaggattcrcccaaaatgcccctgaaa
accctccatcctctgctagaagagggatgcatygatgatgagcctctaccgcacaaaaag
gttggattcattggcatctccaactgggctttggatcctgcgaagatgaatagaggcatt
ttcgtctcacgtggcgaccccgacgagaaagagctga
DBGET
integrated database retrieval system
