Salvelinus sp. IW2-2015 (Arctic char): 112074500
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Entry
112074500 CDS
T05762
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112074500
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
112074500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
112074500
NCBI-ProteinID:
XP_023997431
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
METTQVTLAVRGDTSPGEVIAVVGSCEALGDWCHQRAVTLQPAEHDGTLWKRIISVPRGA
VSTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDNGQFGFHNGLECV
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEEEDDEEQEQSAVAW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHTMDPDNLELTFDFFEEDMG
EHVVAGDAHPGTVGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKLSLDLFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDEEEEVDEHQPFPSFSQIFQAVPENVGFNIELKWVCQMKDGSWEGNLSSYFNMNL
FLDIILTCVLQRAGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGISEIYPELMDIRCR
TTQIAMSFAQSENLLGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQPNIFKVEEQHTLQETLKSFVCSCYTIPCQAAPVCPSSTSKKHN
GSAESDSGLSSS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gccgtggttggtagctgtgaagctttaggagactggtgccatcagagagctgtgacccta
caacctgctgaacacgatggcacattgtggaagaggatcatcagtgtgcccagaggtgct
gtgtcaacataccgctatttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccaccagcagccacgcctgatgagccccaca
gaatcacaccttgatattgacaatggccaatttggattccacaatggcttagagtgtgtg
gactctgggtggctgacgtgccagacagagatccgtttgcgtctgcactattcaaagacg
tctcctgtatccatcaccaagaagaaatataagaagtctcgtttcaggatcaagctgaca
ctggaaggtgtagaagaggaggaggatgatgaagagcaggagcagagcgcagtagcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcctgagtgtggttatgccctggaggcctcacagtggacagagtacgtcatc
cacaccatggaccctgacaacctggaactcacctttgacttctttgaggaggacatgggt
gagcatgtggtggcaggggatgcccacccggggaccgtgggtacggcctgccttctctcc
tcattctttgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtccgagtggactacctggtgatccgtcctatcgag
ggactacagtgtgacatgagctcgtccttcaccaagtactggaggaagaggagtgccccc
ctggacgtaggccacagaggggccggcagcacacacgcagccaaacataccaaagttagg
gagaacaccattgcctcgtttaaaagtgctgccaatcatggggctgcctatgtagagttt
gacgtccatctctccaaggactgcgtccccatcgtgtaccacgatctcacctgctgcatc
tccactaagaagaaaggagacaagctctctctggacctgtttgaagttcctgtcaaagac
ctcacatacgaccagctacagcagctcaagttgggccatgcttctgccttgaaggtgaac
gaccacaaagatgatgatgaagaggaagaggttgacgagcatcagcccttcccttccttt
tcccagatattccaagcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgggtt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaacctg
ttcctggacatcatactgacctgtgtgctgcagagagctggcaagagacgcatcgtcttc
tcytgcttcgaccctgacatctgcactatggttcgtcagaagcagaacaagtacccaatc
ctgttcctgacccagggcatctctgagatctacccggagctcatggacatccgctgtcgc
accacacagatcgccatgagcttcgcacagagcgaaaacctcctgggtattagtgcccac
actgaggagctccttcagaacctggagcacatccgagaggcccagtctaaaggcctggta
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggaacag
ggcattgacggactcatctacgacaggatctgtgacgaccaggtcgagcagcctaacatc
ttcaaagtagaggagcagcacacgctgcaggaaacgctcaagagctttgtgtgttcctgc
tacaccatcccctgccaggcggctcctgtctgcccctcctccacctccaagaagcacaac
ggcagtgcagagtctgactcgggcctcagctcctcctga
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