Salvelinus sp. IW2-2015 (Arctic char): 112074894
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Entry
112074894 CDS
T05762
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112074894
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112074894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
112074894
Spliceosome [BR:
salp03041
]
Common components
Common spliceosomal components
SR proteins
112074894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112074894
NCBI-ProteinID:
XP_023997742
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGGGGDGGG
APRGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKE
DMTYAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNGRSNSRSRSF
SPPRRSRPSPRYSPRHSRSRSRT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataagtacggggcgatccgagatatcgatctgaaaaaccggaggggaggaccg
ccgttcgctttcgtggaattcgaggaccccagggatgctgatgatgcggtgcacggtcgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagtgggcgtggg
ggagggagagggggtggtggcggcggcaggggtgggggcggcggcggcgatggaggaggg
gccccaagaggacgatacggacctccctcgcggcgctcagagtacagagtcatcgtctca
ggtctcccctctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgat
gtatgttatgccgacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggag
gacatgacctacgctgtccgcaaactggacaacaccaagttccgctcccacgagggagag
actgcgtacgttcgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgc
tctcgtagccgtagcaacgggcgtagcaacgggcgtagcaacagccgctcgcgcagcttc
tcgccgccgcgacgcagccggccttcgccacgctactcgccacgacactcccgatcacgc
tcccgcacctag
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