Salvelinus sp. IW2-2015 (Arctic char): 112075037
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Entry
112075037 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC112075037
KO
K06084
F-box protein 20
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112075037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
112075037
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112075037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112075037
NCBI-ProteinID:
XP_023997861
LinkDB
All DBs
Position
Unknown
AA seq
2133 aa
AA seq
DB search
MEWREQTSVTCEDAFTEAQRWMEEVTNNHSGATIPLCSGERSLLCQTESCSASEYCGTVV
YISGEWSPALPVSIVGTVVYISGERSPALPSNQQLKPGLVKRMNTLPTPMAGLDNVNVFL
RACGTLGLHEAQLFHPGDLQDLSTRATLRCVESKRRLKNVLITIYWLGRKAQVDPFYTGX
QLNLKAFEGLLGIALSKALEETPRGSVKDYDYSDVSYPERDDELLPLTQSQPGYSRQDSV
ESFNSVLSFDSAESRTRSCISDSILRAGSEDSSSDVEAENCFRMKAAEGRDSGQRNWGNV
PASLQRKKREENRIKGSMPSPLTSVAPPPPLSPPLPQLPDVKAFLRWAYHRDSDADRPQP
DVVADDLASRRFRSLSPATPTNFAVPMSPQGTLRLWTGSPRLFRIDPHPRHTAVFSPSSS
TASSPSFLPTVTRPPASSITLSEVERSPRRGLLLMALCEEDSEEGRENPDPVKDDLYARR
VELAXHQTTSNPGYNRFLPRYWTPXEEVHVRTIRLGSQRRPWYHEMCRFRNRRASAEDRG
RLSRGTAGRLSRGTAGRLSRGTAGRLSRGTAGRSVPRDRRASVPRDRRASVPRDAGVCPE
DRRVVPRTGRCPHNTCPVQKNLEVNPGWIWSKSLNDIRWFPSATQVVRQVSEGGMELSPS
AVSQDQLQRGRVRVHESEAKWHNDLTKWKLRRHRSNCDLRRKMQERDNIVLMTNAGVVTG
GTCRSLREDREEDEESLYGSSHNKVSPSTSAKEGSLELRPHTSSSVESPYSSGASEPFTT
PSLTLQAQGPSAGAVPQSEPLVLGERRRTPVEPDGAGGLATFPNSASPFSSQTHAQTISS
PALVISSGRDQNISSLSNGIPTTHSGSCLTTSSSLTTSDLVNGTGSNLTSGTSFHCPSAS
MDIPDQALLSTVESLTSVVAPAPGHVSAPQQQALPLYRYSSRAPGGRGVSASLPRGYRRS
EGSSSCLSAGFTPRPFGAKSCRVSSLPRLYNYSVLLSKSLNDIRWFPSATQVVRQVSEGG
MELSPSAVSQDQLQRGRVRVHESEAKWHNDLTKWKLRRHRSNCDLRRKMQERDNIVLMTN
AGVVTGGTCRSLREDREEDEESLYGSSHNKVSPSTSAKEGSLELRPHTSSSVESPYSSGA
SEPFTTPSLTLQAQGPSAGAVPQSEPLVLGERRRTPVEPDGAGGLATFPNSASPFSSQTH
AQTISSPALVISSGRDQNISSLSNGIPTTHSGSCLTTSSSLTTSDLVNGTGSNLTSGTSF
HCPSASMDIPDQALLSTVESLTSVVAPAPGHVSAPQQQALPLYRYSSRAPGGRGGVSASL
PRGYRRSEGSSSCLSAGFTPRPFGAKSCRVSSLPRLYNLENSLLKETVPAPHKTAPSRPQ
KMVTISEVAVRVSPGVGATQPSILKARGGPGPTTHPKPSGRDPHPFSPAQPPCLSQTECS
AQVSSAQVRHSDRVCLTLKLNSRPHFGFNTHWDSTGARVGGIQPGSPAELCQLRAGDEIV
SVGGHRVAEMTHSQWKGTMTYALQTGSLTMDVQRHGDNSPTDTSRDAAMVNLAQLNGQEV
NGVTSKDMKGAFRDDPLAIRSKGGSASAISDLQVPSLSTSXSSWSWDPEEERRRQEKWQE
EQECLLQEKYRQDQKRLDDEWQQAQEEAGVEGYRQAEVTPDPLTSRGIVEIRKTFLTGEE
GRSLILKEGRSLEEETDELAEGDTWLQVPSLSTSPSSWSWDPEEERRRQEKWQEEQECLL
QRIRGHLSLPVSLHPCLLLGLLPLIIQPLLVLPVLLLYNIATRRVNCPISILSDYRVMCE
YCRVMCEYCRVMCEYCRVMCEXSHLAEAQGDGGGVGNDSNQSSHLAEAQGDGGGVEGFVF
TYWSCWNNILHSLDNAQMTVLLYWSCCSNYDLIGYPVVTLLSGWLLGGTGEVARRKPGQS
MSVVEAERQQILEEMRKRTALLTDNSWIRQRSTSDNKQPTNRRGPMRRYDSLDNLPSSSS
LLSNPQRPHSSLGFSAPYHPPSSRHSMGGALGGYSNGTQKHSPTWPRPSSTSSTPPNTGE
EPATGQSRPVSQQHDRVLTARQVCSVCVCPMGRGAAMVIETLNLCFHLACFQCVDCRCRL
GGSEVRAQIRISNGKPYCDPCYIRLKSHLATSL
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgagaacagaccagtgtgacctgtgaagatgccttcaccgaggctcaacgg
tggatggaggaagtgacaaacaatcattcgggagcaacaattccgctctgctctggagaa
cggagtctgctctgccaaacggagtcctgctctgccagtgagtattgtggaactgtagtg
tatatctctggagaatggagtcctgctctgccagtgagtattgtgggaactgtagtgtat
atctctggagaacggagtcctgctctgccatctaatcaacagttgaagccaggccttgtt
aagagaatgaacacactgcctactccaatggctggactggacaatgtgaatgtgtttctg
agagcctgtggtacactgggtctacacgaggctcagctgtttcaccctggagacctgcaa
gacctttccacacgcgctacactcaggtgtgtagagagcaaaaggaggctgaaaaacgtt
ctaatcaccatctactggctgggtcggaaggctcaggtggaccccttctacactggcnnt
caactcaacctcaaagcattcgagggactgctgggcatcgctctgtccaaggctctagag
gaaacccccagaggcagtgtgaaggactatgactacagtgacgtgagctacccggagagg
gacgatgagctgctacctctaacccagtcccagcccggctacagcagacaggactccgta
gagagctttaactcggtcctgagctttgactcggcggagtcacgtacccgcagctgtatc
tctgactccatcctgagggccggcagcgaggactccagcagtgacgtggaggcagagaac
tgttttaggatgaaggcggcggagggcagagactcgggacagaggaactggggcaacgta
cctgcatccctccagaggaagaaacgggaggaaaaccgaattaagggctccatgcccagc
cccctcaccagtgtggcccctcctcctcctctgagcccgcccctcccccaactgcctgat
gtgaaggccttcctccggtgggcttaccaccgcgactcggacgccgaccggccccagccg
gacgttgtcgcagacgacctggccagtcggcggttccgctccctttcaccagccacgccc
acaaattttgcagtacccatgagcccgcagggcacgttgaggctgtggacaggaagccct
cgtctgtttaggattgacccccaccccagacacaccgcagtgttctctcccagcagcagt
actgcctcgtctccgtccttcctcccaaccgtcacacgaccccccgcgtcttcaatcacc
ctctccgaggtggagcgctctcctcgacgaggactcctcctgatggcgctgtgtgaggaa
gactccgaggaagggcgagagaatcctgaccctgtcaaagatgatctgtacgctcggcgg
gtggaactggccntccaccagacgacctccaaccctggctacaaccgcttcctgccccgc
tattggactccgnaggaggaggttcacgtcaggaccatcaggctgggctctcagaggaga
ccctggtaccacgagatgtgcagattcaggaaccgccgggcgtctgccgaggaccgcggg
cgtctgtcccgagggacggccgggcgtctgtcccgagggaccgccgggcgtctgtcccga
gggaccgccgggcgtctgtcccgagggaccgccgggcggtctgtcccgagggaccgccgg
gcgtctgtcccgagggaccgccgggcgtctgtcccgagggacgccggcgtctgtcccgag
gaccgccgcgtcgtcccgaggacggggcgctgcccgcacaacacttgtcctgtacagaaa
aacttggaggtaaacccaggatggatatggagcaaatcgttgaatgacatcaggtggttc
ccgtcggccacgcaagtggtgcgccaggtttctgagggtggcatggagctaagccccagc
gccgtgagccaggaccagctgcagaggggcagagtccgggtccacgagagtgaggccaag
tggcacaacgacctgaccaagtggaagctccggcgccacaggtctaactgtgacctgcgg
aggaagatgcaggagagagacaacatcgtcctgatgaccaacgcaggggtcgttacaggc
gggacatgcaggagcctacgagaggacagggaagaggatgaggagtccctatacggcagt
agccacaacaaggtctctccctccacatcggccaaggagggttccctggagctccgaccc
cacaccagctcctccgtggagtctccctacagctccggagcctcggaacccttcaccacc
cccagcctgacactccaggcccagggaccgtcagccggagccgtgccccaatcagagccc
ctcgtcctgggggagaggcgtcgcacaccggtggagccagacggagctggaggtttagcc
actttccccaactccgcctctcccttctcctcccagacccatgcccagaccatctctagc
ccagctctcgtgatctccagtggacgagaccagaacatctcctcgctctcaaacgggatc
cccacgacccactctggctcatgtcttactaccagttcttctctaactacctctgacctg
gtgaacggtaccggctcaaacctaaccagcggtaccagcttccactgcccctctgcctcc
atggacatcccagaccaagccctcctctctactgtagagtccctgacctcggtggtagcc
ccagccccaggtcatgtctcagctccccagcagcaggcgctccccctctacaggtacagc
tccagggctccaggaggaagaggggtgtctgcttctctccccaggggataccgccggtct
gagggctcttcgtcctgcctctctgccggcttcaccccccggccgtttggagccaagtcc
tgcagagtgtcctcgctacccaggctctacaactattcagttcttctgagcaaatcgttg
aatgacatcaggtggttcccgtcggccacgcaagtggtgcgccaggtttctgagggtggc
atggagctaagccccagcgccgtgagccaggaccagctgcagaggggcagagtccgggtc
cacgagagtgaggccaagtggcacaacgacctgaccaagtggaagctccggcgccacagg
tctaactgtgacctgcggaggaagatgcaggagagagacaacatcgtcctgatgaccaac
gcaggggtcgttacaggcgggacatgcaggagcctacgagaggacagggaagaggatgag
gagtccctatacggcagtagccacaacaaggtctctccctccacatcggccaaggagggt
tccctggagctccgaccccacaccagctcctccgtggagtctccctacagctccggagcc
tcggaacccttcaccacccccagcctgacactccaggcccagggaccgtcagccggagcc
gtgccccaatcagagcccctcgtcctgggggagaggcgtcgcacaccggtggagccagac
ggagctggaggtttagccactttccccaactccgcctctcccttctcctcccagacccat
gcccagaccatctctagcccagctctcgtgatctccagtggacgagaccagaacatctcc
tcgctctcaaacgggatccccacgacccactctggctcatgtcttactaccagttcttct
ctaactacctctgacctggtgaacggtaccggctcaaacctaaccagcggtaccagcttc
cactgcccctctgcctccatggacatcccagaccaagccctcctctctactgtagagtcc
ctgacctcagtggtagccccagccccaggtcatgtctcagctccccagcagcaggcgctc
cccctctacaggtacagctccagggctccaggaggaagaggaggggtttctgcttctctc
cccaggggataccgccggtctgagggctcttcgtcctgcctctctgccggcttcaccccc
cggccgtttggagccaagtcctgcagagtgtcctcgctacccaggctctacaatttggag
aactctctactgaaggaaacggtccctgctccccacaagactgctccctcacgcccccag
aaaatggtcactatctccgaggtcgctgtcagggtcagccctggggtgggagcgacccag
ccctccatcctgaaggccagaggtggtcccggacctaccacccaccccaaacccagcgga
agggacccccaccccttctctcctgcccagcctccctgtctcagtcagacagaatgctct
gcacaggtgagctctgcacaggtacgtcacagtgacagagtgtgtctcaccttgaagctt
aacagtcgaccacactttggtttcaacactcactgggactcgacaggagcacgagtcgga
ggcatccaaccaggtagtcctgcagagttgtgccagctgcgtgcaggtgatgagatagtg
tctgttggtgggcacagggtggcagagatgacccacagccagtggaagggcaccatgacc
tatgccctgcagacgggcagtctcaccatggacgtacagcgccatggtgacaacagtcca
actgataccagcagagacgcagcgatggtgaatctggcccagctcaacggacaagaggtc
aatggggtgacctctaaagacatgaagggggcttttcgggacgatcctctggctatcaga
agtaaaggaggatcggcgtctgcaatatctgatctccaggtgccgtccctcagcacctcc
ncctccagttggtcctgggaccccgaggaggagaggaggaggcaggagaagtggcaggag
gagcaggagtgtctcctacaggagaagtaccggcaggaccagaagaggctggatgatgag
tggcagcaggcccaggaggaggcaggggtggagggatacaggcaggctgaggtgacccct
gatcctctcacgtccagaggcatcgtggaaataaggaagacgtttttgacgggggaagaa
gggaggagcctcatcctcaaagaagggaggagcctggaagaggagaccgatgaactggca
gaaggagatacctggctccaggtgccgtccctcagcacctccccctccagttggtcctgg
gaccccgaggaggagaggaggaggcaggagaagtggcaggaggagcaggagtgtctccta
cagaggatcaggggtcacctcagcctgcctgtatccctccacccctgcctcctcctgggc
ctgctgccactcatcatccagcctcttctggtcctgccggtacttctcctgtacaacatc
gcaacaagacgagtaaactgtccaatcagcattctctcagactacagggtgatgtgtgag
tactgcagggtgatgtgtgagtactgcagggtgatgtgtgagtactgcagggtgatgtgt
gagtantctcatttagccgaggcccagggagacggtggaggggtgggtaatgactctaac
cagtcctctcatttagccgaggcccagggagacggtggaggggtggagggctttgttttc
acctattggtcctgttggaataatatccttcactcattggacaatgctcaaatgactgtc
cttctttattggtcttgctgtagtaactatgatctgattggttatcctgtcgtgactctg
ctctctggttggttattaggcggtaccggggaggtcgctaggaggaagcctggtcagagc
atgtcggtagtagaggctgagaggcaacagatcctggaggagatgaggaagaggactgct
ctgctgaccgacaacagctggatacggcaacgctccacctctgacaacaaacaaccaact
aaccggcgagggccaatgaggaggtacgactctctggacaaccttccctcctcttcctcc
ctgctctctaacccccaacgcccccactcctccctgggtttctccgccccgtaccacccc
ccctcctcccggcacagcatgggtggggccctggggggttactccaacgggacccagaaa
cacagccctacctggccccgtccctccagcacgtcttccacyccacccaacaccggagag
gaacccgccaccggccaatcacgacccgtctcacagcagcacgaccgagtgctgactgcg
cgtcaggtgtgttcagtgtgtgtgtgtcctatgggcagaggggctgccatggtcattgag
accctgaacctctgcttccacctggcctgtttccagtgtgtggactgcaggtgccgactt
ggagggtcagaggtcagagcccagatcagaatcagtaacgggaagccttactgtgacccc
tgctacatccgactcaagtcccacctcgccacctccctgtga
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