Salvelinus sp. IW2-2015 (Arctic char): 112075235
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Entry
112075235 CDS
T05762
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112075235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
ERM_helical
Taxilin
CCDC113_CCDC96_CC
CENP-F_leu_zip
Prominin
Filament
Motif
Other DBs
NCBI-GeneID:
112075235
NCBI-ProteinID:
XP_023998028
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MESHRNGASGSSPDFSRIPQGYNMQQPGPGPRGGPRPQGDSSSKFGVRIQVQGIEGHPYV
VLNNGDSRAALPSGGLESYSRNWDHQEESDNTHSQSDYTSMVNDRRSPLGSPYMERSPLG
SPYMGRSPLGSPYVERSPLGSPYMERSPLGSPYMERSPLGSPYMERSIPNHQGEYARGGS
LTEVRESQRTLASTVSMFDFQEPQLQQLQRTMPASNTVLNFQRHPELLKPYNPDWNSVSP
LSPRLSSTRRLSVPPTQTTSVPRPGHLTRGLQSGTGASLTQGPGSRLGPARIPLPAEGIE
RAPTQTQGPGPALVPDPTQTQGPGPALVPAPTQTQGPGPSLVPAPTQTQGPGPAPVPAPT
QTQGPGPALVPAPTQTQGPGPAFVSAPGPHHHSFTTLLSPPSEVTNIPRRSPNTVDTETI
SSIGSLINQFDGPQQMXRAGPRRGRIAPEDRRRSRSXDSRRQRNSDPSDPSSAASAVRGT
RGETPGGATSAPGSPKGRGANGPSTLMFNKLQWEKEEGPSVVSPKAVKVRYRVEKTSLSR
SRSLNHTEEESKRETQVITPDLLKGQRGLQQVSTETQRPNEDTTKQILFTYLNDGTTDLT
STTQKKVNLVFDRINQLKWKTAENVEEEIRDYTAEAKELQQKGAELEREVSKLKTQLEHK
TKNGRTLAEACEKAQTDMKTVQEELDRRHEELSTLRDRLAGMEAELEVAIDELVQVKAER
EHGRTEMKDLQLQLSEMHDELDQAKNTTRAESTEKQLLLKDLAQLRLDFQELIQVQEEQE
EVLHWRERELTALKGALKEEVESHDKELSIMKEVYDKEAQKLREEMEEVKESNTVLGQEK
REVEEERGEARGQVKERIQEREELRGQVEELESKVDQLNLDIKESKTLQRQLVKCVEQLK
REKQQVEGTLAEVREKEDEISQANKDQLIKLENVQSEMTQLNHQHREVKERLKEERRRTE
ELRRVKSDLDEERRLQNGTVEKLQREMSAKVEECEAATEKLQLQVDEVRKKSHTELTELQ
QQLQEKGLDLEKSQQTTRKLQEELLPLEQGLERSRREWEEAQQRGRQLERKVEELEERNA
HAHEDHARQVKLIEGQMGQLEQDLQDERNSTDLLMNRVDQGKQQMEQIRGELLQERAVRQ
DLECDKITLERQNKDLKSRVSHLEGSQRSNQDVVVSRLEGRIQELEGRLEGEERDNINLQ
QANRKLERKVKEMMIQVMISTIYAEPERPAEPEAEDSEETDGWGRGGDRTSGELQEEVTK
RSGRTDRDQRSDPQPAQRPALRDEA
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcacagaaacggagcgagtggctcttctccagacttcagtagaataccacag
ggctacaacatgcagcagcctggacctggtcccagaggcggccctcgccctcagggcgac
agcagcagcaagttcggggtgaggatacaagtccaggggattgagggtcatccttacgtt
gtattgaacaacggggatagtagagcagctctgccgtctggtggcctggagagctacagc
aggaactgggaccaccaggaagagtctgacaacacccacagccagtctgattacacctcc
atggtgaatgataggcgatctccrctaggaagtccctatatggaacgatctccactagga
agtccctatatggggcgatctccactaggaagtccctatgtggaacgatctccwctagga
agtccctacatggaacgatctccgttaggaagtccctatatggaacgatctccactagga
agtccctatatggagcgcagtattcccaaccaccagggggagtatgctcgtggaggttct
ctgactgaggttagggaatcacagaggacgctggcgtccaccgtgtccatgttcgacttc
caggagccacagttacagcagttacagaggaccatgccggcatctaatacggtgttgaac
ttccagagacacccagagctgctgaaaccttacaacccagactggaacagcgttagcccc
ctcagcccccgcctctcctccacccgaagactctctgttccccccactcagacaacctct
gtacctaggccgggacatctcaccagaggtctccagagtgggacaggggcctccctgacc
caggggccagggtctagactaggaccagccaggatccctctgcctgctgagggtatagag
agagcccccacccagacccaaggcccaggccctgcccttgtcccagaccccacccagacc
caaggcccgggccctgcccttgtcccagctcccacccagacccaaggcccgggcccttcc
cttgtcccagctcccacccagacccaaggcccgggccctgcccctgtcccagctcccacc
cagacccaaggcccgggccctgcccttgtcccagctcccacccagacccaaggcccgggc
cctgcctttgtctcagccccaggtccccaccaccattcttttaccaccttactaagtccc
ccaagcgaggttaccaacatccccaggaggtccccaaatacagtggacacagaaaccatc
tcctccataggtagccttatcaaccagttcgacggcccccagcagatggrccgagctggg
cctaggagagggaggatagcccctgaggaccggaggaggtcacgcagcrtggacagtagg
cgacagcgaaactcagacccatcggacccctccagcgctgcctcggccgtcagagggacc
aggggagagactccagggggagcaaccagcgctcccggatcacctaaggggagaggggcc
aacggaccctccactctgatgtttaataagctccagtgggagaaggaggaggggcctagc
gttgtgtcacctaaagcggtgaaggtacggtacagagtggagaagacctccctgagcaga
tccagatctctcaaccacacagaggaggagtcaaagagagaaactcaggtcatcactcca
gatcttttgaaaggtcagaggggtctgcagcaggtctcaactgaaacacaacgaccaaat
gaagacaccactaaacagatactgttcacttacctcaatgatgggaccactgatttaacc
tccaccactcagaagaaggtgaacctggtgtttgacagaatcaaccaactgaagtggaag
actgcagagaatgtggaggaggagatcagggattatactgcagaggccaaggagctacag
cagaaaggagcagaactggagagagaggtgtcaaagctgaagacacagttggagcataag
accaagaatggtagaaccctagcggaggcatgtgagaaggctcagacggacatgaagact
gttcaggaggaactggacaggagacacgaggaactctccacgctacgggataggctggct
gggatggaggcggagcttgaagttgccatagacgagctagtccaggtgaaggcagagaga
gaacatggccgtacagagatgaaggacctccagctgcagctgtcggagatgcatgatgag
ctggaccaggctaagaacacaacacgggcagaaagcacagagaaacagctccttctgaag
gatctggcccaactgcggttggacttccaggagctcattcaggtgcaggaggagcaggag
gaggtgctacactggagggaaagggagctgactgccctgaagggagcgctgaaggaggag
gtggagagtcatgacaaggagctgagcattatgaaggaggtgtacgacaaggaggcgcag
aagctacgagaggagatggaggaggtgaaagagagtaacacagtgctgggccaggagaag
agggaggtggaggaggagagaggggaggcccggggccaggtgaaggagcggatccaggag
agagaggagcttaggggacaggtagaggagctggagagcaaggtggaccagctcaacctc
gacatcaaggagtccaaaactctacagagacagctggtgaaatgcgtagagcaactcaag
cgagagaagcagcaggtggagggaacgctggcggaggtgagggagaaggaagacgagatc
agccaggcaaacaaagaccaactaataaagctggagaatgtacagagcgagatgacccag
ctgaaccaccagcacagggaggtgaaggagaggctgaaggaggagaggaggagaacagag
gagctgaggagggtgaagagtgatctggacgaggagaggagactgcagaacggcactgtg
gagaaactgcagagggagatgagtgctaaggtggaggagtgtgaggcggccactgagaag
ctccagctgcaggttgatgaagtcagaaagaagagccacacagagctgactgagctccaa
caacagctgcaggaaaagggactggacctggagaaatcacaacagacgaccagaaaactg
caggaagagctgcttcccctggagcagggtctagagcggagtcgtagggagtgggaggag
gcccagcagagaggcaggcagctggagaggaaggtggaggagctggaggagaggaacgca
catgcccacgaggaccacgcccgacaggtcaaactcattgagggtcagatgggccagctg
gagcaggatctgcaggacgagaggaacagtacagatctcctgatgaacagagtggatcaa
ggaaaacaacagatggagcagataagaggtgagctgctgcaggagagagcagtcagacag
gacctggagtgtgacaagatcactctggagagacagaataaggacctgaagagcagggtg
tctcatctagagggctcccagaggtccaaccaggatgttgtggtctccagactggagggg
aggatccaggagctggaggggaggctggagggagaggagagagacaacatcaacctgcaa
caagccaaccggaaactagagagaaaagtgaaggagatgatgattcaagtgatgatcagc
acaatctatgcagaaccagaaagaccagctgaaccagaagctgaagacagcgaagagaca
gatggatggggccgaggaggagatagaacgtctggagaactccaagaggaagttacaaag
agatctggacgaacagatagagaccaacgatcagatcctcagccagctcaacgccctgcg
ctcagagatgaggcgtaa
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