Salvelinus sp. IW2-2015 (Arctic char): 112075245
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Entry
112075245 CDS
T05762
Name
(RefSeq) protocadherin-18-like isoform X1
KO
K16499
protocadherin delta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112075245
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
112075245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
TMEM154
Motif
Other DBs
NCBI-GeneID:
112075245
NCBI-ProteinID:
XP_023998036
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MEPGKIICLFYIRIWILLAVMALTTQXXKGKTLKYQVYEEQKVGTVIARLKDDVADVLVK
LPSSVSLRFRAMQRGSTSFLSVREQDGEISIRSKIDREKLCEKNLNCSIEFDVLTLPTEH
LQLFHVEVEVLDINDNAPQFARAVIPIEISESAAVGARIPLDSASDPDVGENCLDTYSLE
PNNYFKIDIQSRTDGAKYSELVVLRELDRELQPGYELQLTASDKGVPPKTGSTLLRITVA
DSNDNSPIFEQSSYVIHLLENSPVGSLLIDLNATDADDGTNAKIIYSFSSHVSPKIVETF
KINSDNGHLTLMKRVDFESATSYDIVVQAQDMGPNSMPAHCTILIKVVDINDNKPDISIN
LMSQGDRGKEDSAYISEAAPLDSFVALVRVEDLDSALNGEVVCKLHGQGSFKLQKTYENN
YMILTNVSLDREKRSEFSLTVIAEDRGTPSLSTIKHFTVHVLDENDNAPRFQKGRYEVFR
SENNAPGAYLTSLLATDPDLDANSQVSYFLVENTIHGSSISTFVTIDPSNGAVYALRTFD
REDXSRISFVVQAKDAGEPSLLSNATVVLTILDENDNPPVIVVPQLWNLTADVPISKYTE
AGSLVTVVRATDRDTGVNAELACSITAGNEEGFFSMDPRTCEISANVSLDTFPREFAELT
VLVSDHGSSPQTTKAVLKISLYENXEGHVQVLDQGETPLDASLIIIVSLGAICTLLLVIM
VMFAARCNREKKDTRNSYNCRLAETNHLTHPKKPSRQIHKGDITLVPTVNGTLPIRAHHR
SPSATPPMDRAPMGSRQSHHSHQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSM
LHQGQYQPRPCFRGNKYSRSYR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggaacctggtaaaataatctgtctattttatatccgaatatggatacttctcgccgtt
atggcactgaccacgcaakacgrcaaaggtaaaacattaaaatatcaagtttacgaggaa
cagaaggtggggactgttattgcacggcttaaagatgacgtggctgatgttttggtcaaa
cttccaagttctgtgtctttgcgcttccgagccatgcagagaggaagcacgtctttccta
tccgtgcgcgagcaggacggagagatcagcatccgttccaaaatagaccgagagaagcta
tgcgagaagaacctcaactgttccattgaattcgacgttctgactcttccgacagaacac
ctgcagctcttccacgttgaggtggaagtgttggacattaatgataacgcgccccagttc
gcccgcgccgtaatccccatcgagatctccgagagcgcggcagtgggggcgcgcattccc
ctggacagcgcgagtgaccccgacgtcggggagaactgcctcgatacttactccctcgag
cccaacaactacttcaagattgacattcagagcagaacggacggggctaagtactcagag
ttggtggtgcttagggagctcgacagggagctgcagccgggttatgaacttcagctgacg
gcctccgataagggcgttccccctaaaaccggttctactctcctcagaattaccgtggca
gattcaaacgacaacagtcctattttcgaacagtcttcatatgtgattcatctattggag
aattcacctgttggatctcttcttattgatctgaatgcgactgatgcagacgacggaacc
aacgccaaaatcatctactcctttagcagtcacgtgtccccgaaaatcgtggaaacgttc
aagatcaactcggataacggccacctgacgctcatgaagcgcgtggactttgaaagcgca
acatcatatgacatcgttgtccaagcccaggatatgggccccaactccatgccagcacac
tgcacgatcctcatcaaggtagtggacataaacgacaacaaaccagacatcagcatcaat
ctcatgtcccaaggggacagaggcaaagaggactcggcctatatctccgaggccgctcca
ttggattccttcgtggccttagtaagagtggaggacctagattccgctctcaatggagag
gttgtgtgtaaactccatggccaggggagttttaaactacagaagacctacgagaacaac
tacatgatcctcactaacgtctcgctggatcgggagaagaggtcagagttcagcttgacg
gtcatcgccgaggaccgcggcacgcccagcctctcgaccatcaagcacttcaccgtgcac
gtgctggatgaaaacgacaacgctccgcgcttccagaagggacgctatgaggtcttcaga
tcagagaacaacgcccctggcgcctacctgacgtcgttattggcaaccgaccccgacctg
gacgccaacagccaggtgagctacttcctggtggagaacaccattcacgggagctctatc
tccacctttgtcaccatcgacccgtccaacggcgctgtttacgccctccgcacgttcgac
cgcgaggacytcagccggatatccttcgtagtccaggccaaggacgccggggaaccctcg
ttgctgagcaacgccaccgtcgtcctgacaatcctggacgaaaacgacaacccgccggtc
atcgtggttccgcagctctggaacctcacggccgacgtcccaatctccaagtacaccgag
gccggtagcctggttacggtcgtcagggcgaccgaccgagacacgggcgtcaacgcagaa
ctcgcgtgttcaatcactgctggcaacgaggaaggcttcttctctatggatcctagaacg
tgcgagatcagcgccaacgttagcctcgacacgtttccccgcgagtttgcggagctcacc
gtcctggtcagtgaccacggttcgtcgccccagaccaccaaggccgtcctaaagatcagc
ctctatgagaacarggagggccacgtgcaggtgctggaccagggggagacgccgctcgac
gcctccctcatcatcatcgtgtccctgggggccatctgcactctgctcctagtcatcatg
gtcatgttcgctgcccgctgcaaccgagaaaagaaggataccaggaactcgtacaactgc
aggctggcagagaccaaccacctgacccaccctaagaaaccgtcacggcagatccacaag
ggtgacatcacacttgttcccacggtgaatgggactctaccaatcagagcgcaccaccgc
tcaccctcggccacgccccccatggaccgggctccaatgggaagccggcagagccaccac
agccaccaatcactgaatagcctggtgacgatatcgtccaatcatatcccggagagcttc
gccctggagttggcccacgctacgccacccgttgagcaagtctcacagcttctgtccatg
ctccatcagggccagtaccagcctagaccctgtttccgtggcaacaaatactccagaagc
tacaggtaa
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