Salvelinus sp. IW2-2015 (Arctic char): 112075351
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Entry
112075351 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear translocator-like
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112075351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
112075351
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112075351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_11
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
112075351
NCBI-ProteinID:
XP_023998130
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MLFNPDMDSSNPDIPDDSLGLGAGGAQASSSAVVPKGSNKRRAAPDFDDDDDDDDDGSKL
FRCDDDGGGGDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRM
AVSHMKSLRGSGNTAADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLT
PVLNQSQSDWLGSSLYDQLHRTTXSKLREQLSTAENNNTGRMLDLKTGTVKKEGQQSSVR
MCMGARRSFICRMRCGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTGYIKS
WPPTGVNLTDEEADNIQGSRYCLVAIGRLQVTSCPSDTDINSISVPVEFISRHNCQGLFT
FVDHRCMATVGYQPQELLGKNVLELAHPEDQGLLRDSFQQVVKLKGQVLSVMFRFLSRTR
AWLWIRTSSFTFQNPFSEEIEYIICTNANVKQLQQQQAELGGGGRDGLYEAGQVTLPQMP
VQAVTAAGTDHSKTMDKAEMHPPCTQPDQAKFLPSTSAPEYPSTLRTTNNYTTANRSNDT
YSRSVGMAPQMVQSSHSAGQMLAQMSRQNGAPPPTAAPYREGPAVGWPGPAAGARPLXQP
GGPQAGKALSPQFAMGSFVGGSSSSFGVMPPAAPTPTTGANXPNINPRASLNTNGYDGLG
SGQQFPSRAAEAVWXQWQGQQQXQNSAEQHPHAQNNQPDIFPDVLAMLDQPANFNNDDFE
IPIYPSFNE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaacccggacatggactcttctaacccagacataccagatgattctctgggt
ttgggagccggtggggcccaggcaagcagcagtgctgttgtgccaaaagggtccaataag
aggcgagctgcgccagacttcgatgatgatgatgatgatgatgatgatggaagcaagctc
ttcaggtgtgatgacgacggaggaggaggagacaaagagcgatttgccagggagaaccac
agtgagattgagcggcggcggaggaayaagatgactgcttacatcacagagctgtcggac
atggttcccacctgtagcgcgttggcacggaaaccagataagctgaccatcctgcgcatg
gccgtgtcccacatgaagtctctgagagggagcggcaacactgcagcagacgggacatac
aaaccatccttcctcaccgaccaggagctgaaacacctgatcctggaagctgctgatggc
ttcctgtttgtggtgtcgtgtgagagtggacgggtcgtctacgtgtcagactccctgacc
cctgttcttaaccaatcacagtccgactggctaggctcctcactctacgaccagctccac
cggacgacgnngagcaaactacgagagcagctctctactgcagagaataacaatacaggg
aggatgttagacctgaagacaggaacagttaagaaggagggacagcagtcctccgtgagg
atgtgtatgggagccagacgatccttcatatgtaggatgagatgtggttcgtgtccagtg
gagcccatgtctatgaacagattgaatttcctgcggagcaggaacaggaatggtctgggt
ccacccaaggatggggagcctcagtatgtggtggtccactgcactggatacatcaagtcc
tggccccccacaggggtgaatctaacagatgaggaagcagacaatattcaggggagtcgc
tactgtctagtcgccatcggtagacttcaggtgacctcttgcccgagcgacacagacata
aacagcatcagcgttccggtggagttcatctctcgtcacaactgccagggcctctttacc
ttcgtagaccaccgctgcatggccacagtgggctaccagcctcaggaactgctgggtaag
aacgtcttggagctggcccaccctgaggaccagggtctgctgagagacagcttccagcag
gtggtcaagctgaagggtcaggtgctgtccgtcatgttccgcttcctgtcaagaaccaga
gcctggctctggatcaggaccagctccttcaccttccagaaccccttctctgaggagata
gagtacatcatctgtaccaacgccaacgtcaagcagttgcagcagcagcaagcagagttg
gggggaggagggagagatggtctgtacgaggcaggacaggttacacttccacagatgcct
gtccaggccgtgaccgcagctggaactgaccacagtaagaccatggacaaggcagagatg
caccctccatgtacccaaccagaccaggccaagttcctgccctccacctctgccccggag
tacccatctaccctcaggacaacaaacaactacaccactgccaaccgctccaacgacaca
tacagcaggtcagtagggatggcccctcagatggtgcagtcatcccactccgcaggccag
atgctggctcagatgtcccgtcagaacggggcaccccctccaacagcagccccctacagg
gaggggccagcggtgggctggccggggccagcggcgggggctagacccctttaacaacca
ggtgggccccaggcagggaaggccctgtctccccagtttgccatggggagttttgtgggg
ggctcttcctcctcatttggggtgatgccacctgccgctccgacccccaccacgggggct
aacntaccaaatatcaacccccgcgccagcctcaataccaacggatatgatggcttgggg
tcggggcagcagttcccctccagggcagcggaggcagtgtggcsccagtggcagggccag
cagcaagytcagaacagygcagagcagcacccccacgcacagaacaaccagcctgacatc
ttccctgatgttctcgccatgctggaccagccggccaacttcaacaacgatgactttgag
attcccatctacccctctttcaatgagtga
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integrated database retrieval system
