Salvelinus sp. IW2-2015 (Arctic char): 112075826
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Entry
112075826 CDS
T05762
Name
(RefSeq) nectin-1-like
KO
K06081
poliovirus receptor-related protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03266
Virion - Herpesvirus
salp04514
Cell adhesion molecule (CAM) interaction
salp04517
IgSF CAM signaling
salp04520
Adherens junction
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
112075826
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112075826
04517 IgSF CAM signaling
112075826
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112075826
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112075826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112075826
04090 CD molecules [BR:
salp04090
]
112075826
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
112075826
CD molecules [BR:
salp04090
]
Proteins
112075826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
I-set
ig
Ig_PVRIG
TM_ErbB1
C2-set_3
HPIP
Motif
Other DBs
NCBI-GeneID:
112075826
NCBI-ProteinID:
XP_023998530
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MPGLNHLDGTYSIRSGEATTEVRRVGSAMAMLASVWIVLLAVNIQAGDGQSVQMDPIKSG
FVGSQVELRCIFVNSNPPVKISQVTWQKFLNGTKQNVAIANPSLGVSVLAPFKERVTFKQ
AAVRHRTPSLEDTTIMFSNLRLSDEAAYICEYTTFPAGNRENMVNLTVFARPLTRMTLTT
PTIVARPQKRKMTVATCLSANGKPQSVIKWDTRLKGEATFQETQNSNGTVTVRSNYVVVP
SRETHKQKLTCIVTYRNERITDSVVLNVQYEPEVKIDGFDGNWYLNRQDVSLTCSTDANP
PVTVYQWKLLNGSLPSTVEIRNNSLIFKGAVTYELAGTYVCDATNGIGTRTGLVEVNVTE
FPNNPPPGGREIPQEQHNAGAVIGGIVGGVVLLAAAATLLFVFLRRRQRTFKGDYSTKKQ
VFGNGYSKAGGLPAHPPIPNNLQYPDDSDDEKKPAQIAVTGGFEASERDFDGDAEDLKRP
YFTVDEGESRDYDERTLAFQYNPGTEIADDMVSQTDGSVISKKEWYV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtctaaatcatctggacggaacatattccatccgctcaggggaagctaccaca
gaggtccggagagttggaagtgccatggcgatgttggcgagtgtttggattgtcctcctg
gctgtcaatatacaagctggagatggacagagtgtacagatggaccccattaagtcaggc
ttcgtgggctcccaggtggagctgcgttgtatcttcgttaactccaaccctccggtcaag
atctctcaggtgacgtggcagaagttcctgaacggcaccaaacagaacgtggccatcgcc
aacccgtcgctgggggtctccgtgctcgcgcccttcaaggagagggtgaccttcaagcag
gcggcggtccgccaccgcaccccgtctctggaggacaccaccatcatgttctccaacctc
aggctgtctgatgaggccgcatacatctgcgagtacaccaccttccctgctgggaaccga
gagaacatggtcaacctcaccgtgtttgcgcgacctctgacccgaatgaccttgaccaca
cctaccatcgtggcccgcccccagaagcgtaagatgaccgtggcgacatgcctctcggcc
aatgggaagcctcagagcgtgatcaagtgggacacgcggctgaagggcgaggccacgttc
caggagacgcagaacagcaacggcacggtgaccgtcaggagcaactatgtggtcgtgccg
agcagagagacacacaaacagaaactcacctgcatcgtaacctaccgcaacgagaggatt
accgacagtgtcgtgctcaacgtgcagtatgaaccggaggtgaagatcgatggttttgat
ggtaactggtacctgaaccgtcaggacgtcagcctcacctgcagcaccgacgctaacccc
cctgtcaccgtctaccagtggaaactgttgaatggatctcttcccagcaccgtggagatt
cgtaacaactctctgatcttcaagggggcggtgacctacgagctagctggaacatacgtg
tgtgatgccaccaatgggatcgggactcgtacaggtctggtcgaggtcaacgtcactgaa
ttccctaacaacccgccacctgggggccgtgagatcccgcaggagcagcacaatgcgggt
gccgtcatcgggggcatcgtaggcggggtcgtcctgttagcggcggccgccaccctgctc
tttgtgttcctgcgccgccgccaacgcaccttcaagggcgactatagcaccaagaaacag
gtgtttgggaacggctacagcaaggccgggggcctgccagcccaccctcccatccccaac
aacctgcagtacccagacgactcagatgacgagaagaagcctgcccagatcgctgtgacc
ggagggttcgaggcaagcgagcgtgattttgacggagacgcggaggacttgaagaggccc
tatttcacggtggacgaaggagagagcagagattacgacgaacggactcttgctttccag
tacaaccccgggacggagatagccgatgatatggtgtcccaaaccgatggctctgtcatt
tcaaagaaagagtggtatgtgtag
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