Salvelinus sp. IW2-2015 (Arctic char): 112076033
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Entry
112076033 CDS
T05762
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein-like isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112076033
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
112076033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
112076033
NCBI-ProteinID:
XP_023998691
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLVCCGGGALFVVSAGGCKIEAFQLGEDGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNAPYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
IIHLPGLSPQQVAICAGYIALQTELEVLVVKLERLPGAPFTQKSADKKPQDHSLVPQDMI
TGAEHDNETEVRREGLAGHRDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGN
LIITYILYRRFAPDFFQDCSVEETRLHSLQFHPVFTSNQEVCVEGGRGVEPTCLFCFFSL
PKTGYLYSVRGGVQMVSAYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCAAVAARAEDP
YIDTTMKACPPITMELCALRIQLFIGLKALCHYRHHIVLLTTADVETREDTERTARRVIE
YKDHTTLRGIFLAVGIEPSTTPALERFLAHSFLNRKSPFTKPQNPSEMGHGWNLYVVNTV
PPLQLYNEMVEYSKTYEETNPLSQSCLHLLSEAHLLLRATLLDPRVGNPVERPQTTCQNL
ALGYNTARTADRQELQQAFQESCAQLGDCFSRFDKRDCHLALPYYKMSGLSLTEVISRNR
GLSNSLCGYGKGFLFFLKHSLYEETLELLTEETANEVLDIFGVAEPSQLPHVIASPSMVR
ASPDSGLAHLERLESIGAPSVPLTLSMAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEH
KLLLHGRGHTVVPTPLARHLRDSQEGLLVAAMVALHENNKVKLDEADLFFQKLCVNLPGP
QGGPQLLVDFWEALLIASSQKAVIQELLFRLTSVYIDRVTRRDSHGMKPLKTADDLINSC
SHYGVPYPWVSILTPAYFSIIQDHQEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGL
SVHLLCATKLDRHESSIERLLDRCPQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAG
GENAILLSALKETLVVVAMELNPLEFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccacccattcgcgtcccagcaaatcgtgccaaccgagcag
gaaccggggttggtgtgctgtggcgggggtgccctattcgtggtgtccgctggaggatgc
aagatcgaggcttttcaactgggtgaagatgggtgtcctctcatctgtcgcttcgccact
atggggactgtgcagagcatcctacacagtgagataggggactacctggtgaccatcgag
gagaagaacaacgccccctacctccgcgcctacaccaactggcgctaccaggcggctgag
aagacgcgcgttggcgtgcgtctgctcggtcatttcctgcgcggctcgtccatgcgcggg
gctcccaaggagcagatggagatcattgagattccactgtttgagcgtccgctgtgtgtg
gcgtgctgtggggtgaccggagacctgctggtggggtgtcctaagagcctggtgctgttc
agtctaaagagacaggccctcaacgacaagctctccatcctggactttgagcgctgtctg
atcatccacctcccgggactgtcgccccaacaggtggcgatctgtgcagggtacattgcc
ctgcagacagagctggaggtgctggtggtcaaactggagagacttcctggtgctcctttt
acccagaagtcagctgacaagaagccccaggaccacagtctggtcccccaagatatgatc
actggagcagaacacgacaacgagacggaggtgaggagagagggtctggctggtcaccgt
gaccaggatgacttcttcattttccccaagcaccaagagctcctaggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggcaac
ctcatcatcacctatatcttatacaggcgttttgctccagacttcttccaggactgcagt
gttgaggagacccgcctgcactccctgcagtttcaccctgtgttcaccagtaaccaggaa
gtatgtgtggaggggggcagaggggtggagccgacgtgtttgttctgtttcttctcgctg
cccaagacgggctatttgtacagcgtgaggggcggggttcagatggtctcagcctatcag
tatccagagaaggcccagcaggccgtcctcactgacctctttctccacatcatcacaaag
aatgctctccagtgcttctcagtgaggtgtgcagcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggagttgtgtgctctgcgt
attcagctgttcatcggtctgaaggctctgtgtcactaccgacaccacatcgtcctgctg
accactgcagatgtggagaccagggaggacacagagaggaccgcacgcagagtcatagaa
tacaaagatcacacaacccttagggggattttcctagcagtaggtatagagccttccacc
acgccggctctggagcgttttctggctcactccttcctgaacaggaagtcacccttcacc
aagccccagaatcccagtgagatgggtcacggctggaacctgtacgtggtcaacaccgtc
cccccgctccagctctacaacgagatggtggagtacagcaagacgtatgaggagaccaac
cctctgtctcagagctgtctgcacctgctcagtgaagcccaccttctcctgagagccacg
ctcctggacccccgggttggaaaccctgtagaacggcctcagaccacttgtcagaacctg
gccctgggatataatacagcacgcaccgcagacagacaggagctgcagcaggccttccag
gagagctgcgcccagttaggagactgcttcagcaggtttgacaagcgggactgccacctg
gccctgccctactataagatgtcaggcctgtctctgacagaggtgatctccaggaacagg
ggtctgtcaaacagcctctgtggctacgggaagggcttcctcttcttcctcaaacactcc
ctctatgaggagaccctggagctgctcactgaggagacagccaacgaggtgctggatatc
ttcggtgtggccgagccgtcccagctcccccatgttatagccagcccctccatggtcaga
gccagtcctgacagtggcctggcccacctagagcgcctagagtccatcggagccccctct
gtacccctcactctctccatggctgccctggccctccgcatgggagacctgcagctctac
agacaacacatggacagacacacagagatgctgcaggtatatgggttcatcgaggagcac
aaactgctgctgcatggcagagggcacacggtggtgcccacccccctggcacgccacctc
agggacagccaggaaggtctgctggtagcagccatggtggcgctacacgagaataacaag
gtcaaactggacgaggctgacctcttcttccagaagctttgtgtgaacctgccggggccc
cagggaggccctcagctgctggtggacttctgggaggccctgctgatagcctcgtcacag
aaagctgtcatccaggagctgctgttccgcctcacctctgtctacattgaccgcgtcacg
cgccgagacagccacggcatgaaaccactcaagaccgcagacgacctgatcaactcatgt
tctcactatggtgtgccgtatccctgggtcagcatcctgactccagcttacttcagtatc
attcaagatcaccaggaggacctccagaaactacagtccctgctgtgcggtcccaccctg
gatgtgtcgtccatcctgcccctgttggagcagctgccggacggggacaatgcggggcta
agtgtgcacttgctctgtgccaccaagctggaccgccacgagagctccatcgagaggctt
ctggaccgatgtcctcaggccatcatcccctatgctaaccacgagctgcagaataacaaa
atgactctgtggtggcagaaactgtttcctgagctgtgtgagagaaccagagcagcaggg
ggagagaacgccatcttactgtctgcactcaaagaaacgctggtggtggttgccatggag
ctgaacccactggagttcctggacctgttgcctgatgatgggacggcacacttcttcctg
cctcacctgctggagtgcagccagagaaatctcatgacgtaa
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