Salvelinus sp. IW2-2015 (Arctic char): 112076584
Help
Entry
112076584 CDS
T05762
Symbol
tdp2
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
112076584 (tdp2)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
112076584 (tdp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
UBA_8
Exo_endo_phos
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
112076584
NCBI-ProteinID:
XP_023999086
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MSNISKSVSTVEETRTGLCDEFVSITGSDSAVAQCYLAENDWEMERALNSFFEADMEAVF
TVEDSPKKDISPPKVKRQKLDKPQGKMDCIDLTTEEPACSSSSAKSTNSSKSVEPKAKAS
GSEEQDDDKLSLISWNVDGLDTVNLGERARGLCSYLALYTPDVVVSAGTHXTGMFQYLKK
RAVSYTIVEGGEEGYFTGLMLKKSRVKLLNSDIISYPTTQMMRNLLVAQVKFRDQELCVM
TSHFESCKGQAEERMKQLRVVLKRMREAPSNVTVLFGGDTNLRDTEVVKVGGLPSGVCDV
WEQLGKQEHCRYTWDTKANSNKSVPYVSRCRFDRVYLRPAKEGPGSRMTPDHMALVGLEK
LDCGRYTSDHWGIYCSFIPGS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatttccaagtccgtgtcgactgtagaagaaacgaggactggtctgtgtgat
gagtttgtgtccataacaggatccgatagcgccgtggctcaatgctaccttgctgaaaat
gactgggaaatggagagagctttgaactcatttttcgaggctgacatggaagcagttttt
acagtggaagattcaccaaagaaggacatcagcccccctaaagttaaaagacagaagttg
gacaaaccacaggggaaaatggactgcattgacctgaccacagaagagcctgcctgttcc
agcagcagtgccaagtcaaccaactcctccaagtcagtggaacccaaagctaaagcctct
ggctctgaggagcaggatgacgacaaactgtcgctgatctcttggaatgtagatgggctg
gacaccgtgaacctgggagagcgtgcaagaggcctctgttcttatctggccctctatacc
cctgacgtggttgtttctgcaggaactcattgaaccggtatgtttcagtacctcaagaaa
cgagccgtcagctacaccatcgttgaggggggcgaggaggggtacttcactggtttgatg
ctgaagaagtccagggtcaaactcctgaatagtgacatcatcagctacccaaccacccaa
atgatgaggaatctgctcgttgctcaagtgaagttcagggaccaggagctgtgtgtgatg
acgtcccactttgagagctgtaagggacaggcagaggagaggatgaaacagctgagggtg
gtcctgaagaggatgagggaggcgcccagtaacgtgactgtcctatttggaggggacacc
aacctgagggacacagaggtggtcaaagttggaggtctgcccagtggggtgtgtgacgtg
tgggagcagctggggaagcaggagcactgcaggtacacctgggacaccaaggccaacagt
aacaagagtgtaccgtatgtcagcaggtgtcgttttgaccgcgtttacctccggccggcc
aaggagggccccgggtcccggatgaccccagatcacatggccctggtgggcttagagaag
ctggactgtggtcgctacaccagtgatcactggggaatctactgcagctttatccctggc
tcctga
DBGET
integrated database retrieval system
