Salvelinus sp. IW2-2015 (Arctic char): 112077151
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Entry
112077151 CDS
T05762
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018
RNA degradation
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112077151 (lsm6)
09123 Folding, sorting and degradation
03018 RNA degradation
112077151 (lsm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112077151 (lsm6)
03041 Spliceosome [BR:
salp03041
]
112077151 (lsm6)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112077151 (lsm6)
mRNA degradation factors
5'-3' decay
Lsm complex
112077151 (lsm6)
Spliceosome [BR:
salp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112077151 (lsm6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
112077151
NCBI-ProteinID:
XP_023999498
LinkDB
All DBs
Position
Unknown
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcagaaagcagacccccagtgactttctgaagcagatcattggcagaccagtt
gtggtcaagctcaactctggagtggattacagaggtgtcctagcctgtctggatggctat
atgaacattgcagtggagcagacagaggagtatgtcaatggccagctgaagaacaagtat
ggtgacgccttcctgagaggaaacaatgtgttatacatcagcacccagaagaggaagatg
tga
DBGET
integrated database retrieval system
