Salvelinus sp. IW2-2015 (Arctic char): 112077154
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Entry
112077154 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112077154
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112077154
04082 Neuroactive ligand signaling
112077154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112077154
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
112077154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
112077154
NCBI-ProteinID:
XP_023999500
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MLCFLFGSVLSHVPACVYRTLRCAPLLQESGSIFLQFSSSTSLQLEVIFKILEEYDWTTF
SVVSTRHHGYQDFLSVVDGLTEDGLTLSLGKKSVVMLNVTDDPGGGTRRLLKENEAQVRL
LYCSQEEAELVFKQAAWAAGQAGPSHMWFAVGPALSGLGMEGLPRALFAVRPQGWKDKPR
MRIARGVSILTHGAVALRRDYGASGGPNFVTNCMTEANQTHRVRGRMRYFSNITLGGRDY
SFDSDGYLANPVLEVISYTPGKGWEDVGMWENGKLDLVYPAWSRYGPFLQPPDGAQHLRV
VTLEERPFVIVELADAASNTCIRDSVPCRRPLNARWWDSEQIGHRIPHHQRGEVRGRGFS
SPSWRRASGHGSVATDRSPSAFLALTQSQCVVGPYEGKAGGSTFTIGKSVWLLWAIVFNN
SVPVENPRGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKVNIEE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcttcctgtttggcagcgttctgtcccatgtgcctgcctgtgtctatagaact
ttaaggtgtgctcccctactgcaggagtcaggctccatcttcctccagttcagctcatcc
accagcctccagctggaggtcatcttcaaaatactagaggagtacgactggaccaccttc
tcagtggtgtccacccgtcaccatggctaccaggacttcctgtcggtggtggacggcctg
acggaggacggcttgacgttatcgctgggaaagaagagcgtggtcatgctgaacgtgacg
gatgacccgggagggggtacgcgcaggctgctcaaggagaacgaggcgcaggtacgtctg
ctctactgttcccaggaggaggccgagctggtgtttaagcaggcagcctgggccgcaggt
caggctggaccctctcacatgtggttcgctgtggggccagccctgtccggccttggcatg
gagggtctccccagggccctgttcgccgtgcgtccacagggctggaaggacaagccccgc
atgaggatcgcccggggcgtgtccatactgacccacggagcggtggcactgcgccgtgac
tatggggcctctggagggccaaactttgtcaccaactgcatgacggaagccaatcaaaca
cacagggtgcgggggaggatgaggtatttcagcaacatcacgttgggtggcagagactac
tctttcgacagtgacggttacctggccaaccccgtcctagaagtaatctcctatacacct
ggcaaaggctgggaggatgtagggatgtgggagaacggtaagttggatttggtttatcca
gcgtggtcgcgttacggtccattcctccaaccgcctgatggcgcacagcacctgcgcgtg
gtcactctggaggaacgtccgtttgtcatcgtggagctggctgatgccgcctccaacacc
tgcatcagagactctgtaccctgccgacgacccctcaacgccaggtggtgggacagcgag
cagataggccatcggatccctcaccatcaacgaggagaggtcagaggtcgtggattctcg
tccccttcgtggagacgggcatcaggtcatggttccgtagcaacggaccgttcaccctct
gccttcctggctctgacacagagtcagtgtgtggtgggaccgtatgaaggaaaggcagga
ggctctacgttcaccataggaaagtctgtgtggttgctgtgggccattgtgttcaataac
tcggtcccagtggagaaccccagaggaaccaccagtaagatcatggtgctgatctgggcc
ttcttcgctgtcatcttcctggcttcctacacagccaacctggctgccttcatgatccag
gaggagtacatagacactgtgtctggactctcagacaaaaaggtaaacatagaagaatga
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