Salvelinus sp. IW2-2015 (Arctic char): 112079124
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Entry
112079124 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
112079124
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112079124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
112079124
NCBI-ProteinID:
XP_024000926
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MSFPQLGYPQYLSAPKRCTAXDRPGVLTPSSRGELXHSGNQSAAAAAVTSVLGMYANPXT
AHNYSAFLPYSXADLALFSQMSSQYELKDSPGVHPGSFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGARSKEDEDGNIFGSDNEGDAEKNDDEEEIDLESIDIDKIDDNDGDQSNEDDDDKPEG
RERHRELESLEKRRAFALQHEAFDKCKNSISSGNDLSDSNTGVVSPDRQGTFQLPVNNKP
KIWSLAETATSPDSSVKSTSPSGPTGHTPPQMQHPAFLPSHGLYTCQIGKFHNWTNGAFL
GQNSLLNVRSFLGVNQHQHHHHNLHLQTQQLQQQQASVLVSPGASPQLSPKHIDRENVVR
SASPPTQLLKSSFRPLHDGPRTQQEASQLVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagttgggctaccctcagtacttaagtgctcccaagcggtgtacggcg
nnggatcggccgggggtcctgactccgtcgtcccggggggagctctgacatagcgggaac
cagtcggctgctgccgctgcagtcacctcggtgttgggcatgtacgcaaaccctnacact
gcacacaactacagcgcgttcctgccttacagcngcgcagacttggctcttttctctcaa
atgagctcccagtacgagctgaaggacagtcctggcgtccatcctggcagcttcgcggcc
cacacctcgccagctttctacccatacggccagttccagtacggggatccggccaggccc
aagaacgccacccgggagagtaccagcacgctgaaggcctggctcaatgagcacaggaag
aacccctaccccaccaagggagagaagatcatgttggccatcattactaagatgaccctg
acgcaggtktccacctggttcgccaacgccaggaggagrctgaagaargagaacaaggtg
acgtggggagccaggagtaaagaggacgaggatggaaacatcttcgggtcggacaatgag
ggagacgcggagaagaacgatgacgaggaggagatcgatctagagagcatcgatatagac
aagattgacgacaacgatggagatcagagcaatgaggatgacgatgataaaccggagggc
agagagcgacaccgagaactggagagtctggagaaacggcgggccttcgccctgcagcac
gaggccttcgacaaatgtaagaactccatttcctccgggaatgacctttctgacagcaac
accggagttgtgtccccggacagacagggaacttttcagctcccagtgaacaataagcct
aagatctggtcgttagctgagacggctaccagtcctgatagttctgtcaagtccacctct
ccgtccggccctaccggtcacaccccgcctcagatgcagcacccagctttcctcccctct
cacggactatacacctgtcagataggcaagttccataactggaccaacggagcttttctg
gggcagaactctctgctgaatgtccggtcgtttctaggagttaatcagcaccagcaccat
catcataacctccacttacagacccagcagctgcagcagcagcaggcctcggtgttggtg
tcgcctggagcctcgccacaactcagccccaagcacatagaccgtgaaaacgttgtaaga
agtgcctctcctccaacgcaacttctgaagtcctcattcagaccccttcatgatggcccc
aggactcagcaagaagcctcgcagctggttctaactgccctctcctcggcttga
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