Salvelinus sp. IW2-2015 (Arctic char): 112079136
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Entry
112079136 CDS
T05762
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
salp04517
IgSF CAM signaling
salp04530
Tight junction
salp04810
Regulation of actin cytoskeleton
salp05100
Bacterial invasion of epithelial cells
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112079136
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112079136
09144 Cellular community - eukaryotes
04530 Tight junction
112079136
09142 Cell motility
04810 Regulation of actin cytoskeleton
112079136
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112079136
05100 Bacterial invasion of epithelial cells
112079136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112079136
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
112079136
Membrane trafficking [BR:
salp04131
]
Others
Actin-binding proteins
Arp2/3 complex
112079136
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112079136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Rax2
PEP5_VPS11_N
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
112079136
NCBI-ProteinID:
XP_024000938
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPPGASGGAGEGAGGGWVHGVCFSHSGNRLAWTSHDSTVAVA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGAAGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCSKFCTTGMD
GGMVTWDVKSLESAMKDLKIV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagcttcctgctcgagccaatcagctgccactcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccatgatgtccacatctataagaaggatgggacc
aagtggaccaagatacatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagacagtaaccgtatcgtgacctgtgggacggatcgtaacgcgtacgtctggtct
ctgaagggggaggtctggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccagggagaacaagtttgctgtgggcagcggatcacgcctcata
tccatctgctacttcgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgttccaccatcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcagcctacatcaaggaggtggaggagaagccc
ggccccacggtctgggggtccaagatgccctttggggaggtgctgtttgagtctgggccc
ccaggggcgtctgggggggctggagagggggcaggagggggatgggtccacggggtctgt
ttctcccacagcgggaaccgcctggcctggacgtcacatgactctactgtggcggtcgca
gagggaggcaagaccagcacgatcagcagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgaaaacagcctggtggccgctggccatgactgctacccggttctg
tttgtatatgacggtgctgcgggctcggtaacgttcggcgggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcg
acctcgtccgagaccaccgagcagggactggagagtctgcacaagaacagcatcagtcag
atctctgtgctggagggaggaaagagtaagtgttccaagttctgtaccactgggatggac
ggagggatggtcacatgggacgtcaagagtctggagtctgccatgaaggatctcaagata
gtctga
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integrated database retrieval system
