KEGG   Salvelinus sp. IW2-2015 (Arctic char): 112079230
Entry
112079230         CDS       T05762                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112079230 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:salp03009]
    112079230 (tbl3)
Ribosome biogenesis [BR:salp03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    112079230 (tbl3)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_NWD2_C WDR54 VPS8_N Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_2nd Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 112079230
NCBI-ProteinID: XP_024001003
LinkDB
Position
Unknown
AA seq 675 aa
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPIASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTPDGASMVSSGRDKICTVWDLKSRTARRTVPVYEAVECVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPAGGSEEGGEE
YGDPRSLTYCLPLPSSLRLATVTAEHNILLYQLPSFTTQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFDLATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAQGCSHANAVGSITCSRMKESFVVSGSQDCTIKVWDIPETIPETDGDIFQLTA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGAPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLPS
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggcaaaaagcaatctccagttcaagaccaactatgctgtttccagcactatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaattcatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgttacagggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgctcc
tggagggccatccacaatgtgcccattgccagcatgacctttgaccccacctccacactc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtattgt
acgcacaacctgaagggctcctctggggtcgtacacctggtggagttccacccagacata
agtctactgcagctcttctcctcagcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acccccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactgccaggaggacagtgcccgtctatgaggctgtggagtgtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctccgctccccccgcggggggctccgaggaggggggagaggag
tatggagacccccggagcctcacctactgtctgcccctgccctcctccctcaggctggcc
acggtcacagcagaacataacatcctgctctaccagctgccctccttcaccacacagcaa
cagtttgttggcttcaatgatgaggtccttgatgtgaagtttctgggcaagggtgacact
cacattgtcgtggcgactaacagctcccagctcaaggtgtttgacctggccaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaaggg
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccagggctgcagccatgctaacgctgtgggttccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatatcccagagaccatcccggaaacagacggtgacatattccagctgaccgcc
cgggtcacagagaaggcacatgacaaagatgtgaatagcgtggcagtgtcccccaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctgggggccccc
ggggccgacctggcccttctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagctgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgcgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggatgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagttgtctaacctgccttcatga

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