Salvelinus sp. IW2-2015 (Arctic char): 112079230
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Entry
112079230 CDS
T05762
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112079230 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salp03009
]
112079230 (tbl3)
Ribosome biogenesis [BR:
salp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112079230 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NWD2_C
WDR54
VPS8_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
112079230
NCBI-ProteinID:
XP_024001003
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPIASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTPDGASMVSSGRDKICTVWDLKSRTARRTVPVYEAVECVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPAGGSEEGGEE
YGDPRSLTYCLPLPSSLRLATVTAEHNILLYQLPSFTTQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFDLATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAQGCSHANAVGSITCSRMKESFVVSGSQDCTIKVWDIPETIPETDGDIFQLTA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGAPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLPS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagcaatctccagttcaagaccaactatgctgtttccagcactatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaattcatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgttacagggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgctcc
tggagggccatccacaatgtgcccattgccagcatgacctttgaccccacctccacactc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtattgt
acgcacaacctgaagggctcctctggggtcgtacacctggtggagttccacccagacata
agtctactgcagctcttctcctcagcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acccccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactgccaggaggacagtgcccgtctatgaggctgtggagtgtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctccgctccccccgcggggggctccgaggaggggggagaggag
tatggagacccccggagcctcacctactgtctgcccctgccctcctccctcaggctggcc
acggtcacagcagaacataacatcctgctctaccagctgccctccttcaccacacagcaa
cagtttgttggcttcaatgatgaggtccttgatgtgaagtttctgggcaagggtgacact
cacattgtcgtggcgactaacagctcccagctcaaggtgtttgacctggccaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaaggg
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccagggctgcagccatgctaacgctgtgggttccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatatcccagagaccatcccggaaacagacggtgacatattccagctgaccgcc
cgggtcacagagaaggcacatgacaaagatgtgaatagcgtggcagtgtcccccaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctgggggccccc
ggggccgacctggcccttctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagctgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgcgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggatgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagttgtctaacctgccttcatga
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