Salvelinus sp. IW2-2015 (Arctic char): 112079735
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Entry
112079735 CDS
T05762
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112079735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112079735
03036 Chromosome and associated proteins [BR:
salp03036
]
112079735
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112079735
Coactivators
SAGA/TFTC/STAGA complex
112079735
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112079735
STAGA complex
112079735
TFTC complex
112079735
SAGA complex
112079735
SLIK complex
112079735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_NTD2
WD40
Beta-prop_WDR5
Beta-prop_VPS8
Beta-prop_IFT122_1st
Beta-prop_THOC3
LisH_PAC1
LisH_TPL
Beta-prop_WDR3_1st
NBCH_WD40
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
112079735
NCBI-ProteinID:
XP_024001361
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MAAVQDGQHNLEVEKDIKTEITNDGSGNINANSSSPGSTSSGGKSKSPAGSGEDQQTLLA
VLQFLKRNKLTESVDILRREAGLSADADDSPVSESAGAGSGGVPNVGADGGDANSLLSRV
SIATPVAPPATAPPKVVAASGGEDQPDVNVVLSAYSQQGDPVLYPLYYNGLKKFIESVLD
CHRAELSQVFYPLFVHMYLELVYNNHENEAKQFFEKFSGDQECYYEEDLRILSSMSKKEH
MKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEGKRDANKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPQQARIPLPELKDSDKLDKIMNMKEATKKIRLGPDNLPSICFYSFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRRVKSAADLSNIDKESDDVLERIMDE
KTASESKILYGHSGPVYGISFSPDR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggtcagcacaatctggaggtcgaaaaagacataaaaacagaa
ataacaaacgatgggtctggaaatatcaatgcaaactcttcgtcacccggttctacgtct
tcgggcggtaaatcgaaatctcctgcgggatcgggtgaagatcaacagacactgctcgcg
gtgttgcaatttctcaagaggaataaattgaccgagtcggtcgatattttgcggcgagaa
gcgggcttatctgcagatgcagatgattccccggtatccgagtcggcaggagctggatcg
ggtggcgtcccaaatgtcggtgctgatgggggggatgccaactctctcctcagccgagtg
tcaatcgccacccccgtcgcacccccggccaccgcacccccaaaagtggtggcagcatca
ggtggggaagaccaaccagacgtcaacgttgtcttgtcggcctatagccagcagggggac
cctgtcctgtacccactctactataacggcctgaagaagtttattgagtctgtcctggac
tgccacagagctgaactctcccaggtcttctacccactgtttgtccacatgtacctggag
ctggtctacaacaaccacgagaatgaggctaaacagttttttgaaaagttcagcggtgac
caggagtgttactacgaggaggacctccgcatcctctcgagcatgtccaagaaggaacac
atgaagggaaatgagaccatgctggacttcaggaccagcaagtttgtcctccgcatctcc
cgagactcctaccagctgctgaagaggcacctgcaggaacgtcagaacaaccagatctgg
aatattatacaggaacatctctatattgatatctttgacgggatgcctcggagtaaaagt
cagattgatgccatgtcgggcagtctggctggggagggcaagagagatgccaacaaagcc
aaggtgttctatggtcttctgaaggagccagagatcgaggtacctctggacgatgaggat
gaggaagcagagaatgaggagggcaaacccaagaagaagaaacctaagaaggacagcatg
ggctccaagagcaagaaacaggaccccaacgcaccccaacaagctagaatccccctcccc
gagctgaaggactctgacaagctggacaagatcatgaacatgaaggaggccactaagaag
atccgtctgggcccagacaacctaccctccatctgtttctactccttcctcaacgcttac
cagggtctgacagcggtggacttcacagatgactccagtctgatcgcggggggcttcgct
gactccaccgttagggtgtggagcgtcacacccaagaaactacgccgggtcaaatctgca
gcagacctgagtaatattgataaagagtctgatgacgtgttggagaggatcatggatgag
aagacggccagtgagtctaagatcctgtacggacacagtggaccagtatacggcatcagc
ttcagccctgacaggtaa
DBGET
integrated database retrieval system
