Salvelinus sp. IW2-2015 (Arctic char): 112079766
Help
Entry
112079766 CDS
T05762
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112079766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
112079766
03021 Transcription machinery [BR:
salp03021
]
112079766
03036 Chromosome and associated proteins [BR:
salp03036
]
112079766
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
ARID
112079766
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112079766
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112079766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
112079766
NCBI-ProteinID:
XP_024001383
LinkDB
All DBs
Position
Unknown
AA seq
2349 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPNEDSILGEKQQENKQPGLERGSPGRGDLQDGADV
GNAGGGGEPEMKNGNGNPSRTINNQNDSIGSEGNNHPGMVHHHGSGFPPPSYGYSQHYGR
APFHQHGGQQSPGMAAAAGPAVQSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPHSGQ
GYGMNPSRNTQAPAAGGQPANVKQQPAGGPTAMAASYNNQRYNMGNPQPTSTPTLNQLLT
SPSSTRIYPNYPSSEYSNQEGASKGPTDTGSSGQYGGGNPGWQQRTHHPPPMSPGSTGQP
LGRSQPPGAMDPMAKMRGQTYGGGSPYSQQPGQGPPPGAQQGHAYPGQGYGPLGSQRYPV
VMQGRTPGAMGGMQYGQQMSSYGQQGPGGYGPQGQGPYYGQQGQALHPGQQQGPYPQAPL
GQQGGQTPYAQQSHPPQTSASHAQGGPLYPQPHMPPQSQGPQPGPSQGPPQSQPPYSQGP
AQAQAQSGQPPYPQQQGPPSQPPQQASSQVPAGSQPQLSYPPTQGPQQPPTQQQQQQPQT
PSQPPQQPPGHSQHPQGQPASYSQNPPQQQQQSQQSPYQRFPPPPQQEISQDSFSSQSSA
PPSNQPKSVSEDVSMQGQPSSLPVSPHPTCAKDLSGSIDDLPTGTDGALSPGVSTSGVSS
SQGEQSNLAQSPFSPHTSPHLPGIRGPSPSPAGSPASATTSRTGPLSPATMPGTQMPPRP
SSVQSDGSLHPAMSQSPMAQDRGFMQRNPQMPPYGSPQSASPLSPRQSSGGQVHPGMGPY
QQQNNSMGGYGPQGGQYGPQGYPRQPGYNNMPNANYPGMGNPMNPGPGNPMSGQGGLPYA
GIPPGRMPPGQVGVRPYGPNMGPNMPPNMGNMPPQVGSGMCPPPGLNRKAQEAAAVVMQH
AATNSIHSRMPGYPNMPPGMMGPGAPYGPPMNNMPGMMNPQGGSPFPMGPNMANNSSGLA
PSPEFGMDGKMNQGQKMNNKVDGTPKAEPTKSKKSSSSTTTNEKITRLYELGPELERKMW
VDRYLGFIEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGFAQVNKNKKWRELSTNLNVG
TSSSAASSLKKQYIQCLYAFECKIERGEDPPPEIITDNKKANQAKVQPPSPAGSGSLQGP
QTPQSTSSSMAEGSDLKPPTPASTPHPTQMPPGARSNVALQDPFADGTDPAFPRRNSMTP
NSGYQSGMSTPEMPGRMGPGPYEGPGPNKDPFGAMRKVGEQFLPASQGPNSGMAEQQQFN
RGPPPGAMGNMSMAQRQQYGPGPYGQGYERRPEQGMGPEGSMGSGAPQPNLMPVNSDTGM
YSPNRYPPQQQPRNDSYGNQYPGHGTPPGGSYPNQQPGMYPQQQQVMALTHCNYKRPVEG
GYPPAKRHEGEMYSAPFSAGLQQQQQPQQQPGVASAPPAGQPEMYQPQYSSGSFTGTDRR
LPGPQGQFPFPFNRERMQAATGPNAQPSMPPQMMQPSPDGPPGGVWQGRGEMNYPGNYPN
RQGGPPGGPAQGPGHPGMNRGSEEMSSEQRMNHEGQWGPGQMGPRQPPYGPGGTGPPMTR
TLQSNYQSAQAMQNHIPQVSSPSPMPRGGPMESRTSPSKSPYMHSGIKMQKAGPPVPASH
IVPQSVQSPLIRRDMPFPPGSVEATHPILKPRRCLTTKDIGTPEAWRVMMSLKSGLLAES
TWALDTINILLYDDNSISTFNLNSLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTL
LDPDALKRDWSCMEDEEPGVEDMKVEGEDEEDDDNEEEEEVVVQRSKQPAGTTIEGQAQV
KQEDEQESCSERDTLIEKDAEDKEKSFSTFEQPSSSSDPPGLGPATPQERPKQASKFDKL
PLKMVRKKDPFPAGRASQRGKVQEFDSGLLHWSAGGGDSTEHIQTHFERREEFLVPREQV
LVVPTAKRKRLGTEMVGDKDNATPTEKDKQKGGGDQRPSQPSSTEKASTTTDTSADGKEG
KSEHSDAETEETSQTEEPQSQQENDKPSGPPRQQVPQRVVEDEPHSKDEGPLLTLANWQD
ALARRCVCVSNIVRSLSFVPGNDQEMSKHPGLMLLLGRLVLLHHRHPERNQAPLTYEKEE
ESDDXLGQREDWWWDCLSLLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPS
AEAHDPFPTLGPHSAMSPQRLVXETLSKLSIQDNNVDLVXATPPLGRLEKLYGTLVRLVG
ERKVAVCREMSVVLLANLAQGDSMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLL
HLQGMHFEPTSNDMMRRAARALHALAKVEENHSEFTLYESRLLDLSVSPLMNSVVSHVIC
DVLFLIGQS
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctcaacacaagtccgccttccgaactaaag
aaaccggatcgagacccaaatgaggattctatactgggggaaaagcagcaggaaaacaag
cagccgggattagagcgcggatctccgggccggggggatctgcaggacggggccgatgtt
ggaaatgcagggggaggaggggaaccagagatgaagaacgggaacgggaacccgtccagg
actattaataatcagaatgattccatcggatccgaggggaataaccatcccgggatggta
caccaccatgggtccggttttcctccaccttcttatggatacagtcaacactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcaggtcca
gccgtgcagtcgagcaatatgatggacccatatcaacccaattcgcacgaccatggcttt
tctaaccaccagtttaacaattacaatccattcccgaacagaactccccattctggccaa
ggatacggcatgaacccctcacgtaatacccaggctccggcagctgggggacagccagct
aacgttaaacagcaaccagcaggaggacccacagcaatggctgcatcttacaacaaccag
agatataatatggggaatccacagccaacgtctaccccaactctcaaccagctactaact
tctccaagctccacgcgtatatatccaaattacccatctagtgaatatagtaatcaggaa
ggcgctagtaagggaccaacagacacgggcagtagcggtcagtatggaggggggaatccg
ggttggcaacaaaggacccatcatccgccgcctatgagccctggaagtacagggcaaccc
ctaggtagaagccagcctccaggtgcaatggatccgatggctaaaatgagaggccagacg
tacggagggggcagtccatactcccaacaacctgggcaggggccaccaccaggagcccag
caaggtcacgcatacccgggccaaggctacggtccccttggctcccagagatacccggtg
gtcatgcagggccgcacccctggggctatggggggcatgcagtacgggcagcagatgtcg
tcttatgggcagcagggaccaggaggctatgggcctcagggccaagggccctactacggc
caacagggccaggctttacacccaggccagcagcaagggccctacccccaggcacctctg
ggacagcagggtggtcagacaccctacgctcagcagtcccaccctccccagacgtcagcc
tcacatgcccagggtgggccgctctatccgcagccccacatgcccccccagtcccaggga
ccgcagccaggtccatcccaagggcccccgcagtctcagccgccctactcccagggccca
gcccaggctcaggcccagtctggtcagcctccttacccccagcagcaggggcctcccagc
cagcctccacagcaggctagctcccaggtcccagcagggtcgcagccccagcttagctat
ccacccacgcagggcccacagcagccccccacacagcagcagcagcagcaaccccagaca
ccctctcaaccccctcagcaaccaccaggtcacagccagcatccacagggccagcctgca
tcctactcccagaatcctccacaacagcaacagcagtcacagcaatcaccttaccaacgc
ttccctcctccaccacagcaggagatatcccaggactcgttcagttcccagtctagcgcc
cctccctccaaccagcccaaaagtgtctcggaggacgtcagcatgcaaggccagccgtcc
agcctaccggtgagtcctcacccaacctgtgcaaaggatctctcaggctccatcgatgac
ctgcccacgggcacggatggcgctctgagtcctggcgtgagcacttcaggtgtgtcaagc
agccagggcgagcagagcaacctggcccagtcgcccttctcgccccacacctctccccac
ctgccaggcatccgagggccctcaccgtcacccgccggctcccccgccagtgccaccacc
tcccgcacggggcccctctcacccgccacaatgccagggacccagatgccccctagacca
tcgagtgtacagtctgacgggagtctgcaccccgccatgagccagtctcccatggcccag
gacagagggttcatgcagagaaacccccagatgcccccctacggctcaccacagtctgcc
tctcccctgtcaccccgacagtcctctggaggccaggtgcaccctgggatgggaccttat
cagcagcagaacaactccatggggggctacggacctcagggtgggcagtatggcccacaa
ggttacccccggcaacctggatacaacaacatgcccaatgccaactacccaggcatgggt
aaccccatgaaccctggccctggcaaccccatgtctgggcaaggggggctgccgtatgca
ggcatcccccctggtagaatgcctccgggccaggtgggagtgcgtccctatggccccaac
atggggcccaacatgccacccaacatgggtaacatgccacctcaggtgggctcagggatg
tgccctccccccggcctcaaccggaaggcccaggaggctgcagctgtagtcatgcaacac
gctgctaccaactccatacacagcaggatgcctggctaccccaacatgccccctggcatg
atgggccctggcgccccctatggccctcccatgaacaacatgcctggcatgatgaacccg
cagggcggctcgcctttccctatggggcccaacatggccaataactccagtggtttggcc
ccaagtccagagtttggtatggatgggaaaatgaatcagggccagaagatgaacaacaaa
gtggacggaacaccgaaagcagaaccgactaaatccaagaagtcgagctcttccacgaca
accaacgagaagatcacgcgtctgtatgagctgggccccgagctcgagaggaagatgtgg
gtggaccgctacctgggctttattgaggagaaagccatgggcatgaccaatctgcctgct
gtgggccgcaagcccctagacctcttcagactctacgtctcggtcaaggagattggaggc
ttcgcacaggtgaacaagaacaagaagtggcgtgagctgtccaccaacctgaacgttggc
acgtcgagcagtgctgccagctccctgaagaagcagtacatccagtgtttgtacgctttc
gagtgcaagatcgaacgcggggaggacccccctcctgagatcatcactgacaacaagaag
gccaaccaggccaaggtccagccaccctccccagctgggtcaggttctctccagggccct
cagaccccccagtccaccagcagctccatggccgagggcagcgacctcaagccccccaca
cctgcctccaccccacaccccacccagatgccacccggggccaggagcaatgtggcgctg
caggacccatttgctgacggtactgacccagctttccccagaaggaactccatgacccct
aactctggctaccagtctggcatgagtaccccagagatgccaggtcgcatgggtccaggg
ccctacgagggtccagggcctaacaaagacccctttggtgccatgcggaaagttggggag
cagttcttgcctgccagtcagggtcctaacagtgggatggctgaacagcaacagtttaac
cgtgggcctcctccaggtgctatggggaacatgtcgatggctcagagacaacagtacgga
ccaggaccttacggacaaggctacgaaaggaggccagagcaggggatgggcccagagggc
agcatgggatctggtgcaccgcagccaaacctgatgcctgtcaactccgacacggggatg
tattcgccaaaccgctacccaccacagcagcagccacggaatgattcctatggtaatcaa
tatcctggccatggtactccccctggtggttcttatcccaatcaacagccaggaatgtac
ccacagcaacaacaggtgatggctctaacccactgtaactacaagcgtcccgtggaaggg
ggctacccaccagcgaagcgtcacgagggtgagatgtacagtgcgcccttcagtgcaggg
ctgcagcagcagcaacaaccgcagcagcagccaggggtggcctctgcaccccctgctggc
cagccagagatgtaccaaccccagtacagcagcggctccttcaccggcactgaccgccgc
ctacctggtccccagggccagttccccttccccttcaacagagagcgcatgcaggctgcc
acggggcccaacgcccagccctccatgccccctcagatgatgcagccaagccctgatgga
ccccctggtggcgtgtggcagggccgcggggagatgaactatcccggcaactaccccaac
cggcaaggtggccccccagggggcccagcccagggacctggccaccccggcatgaaccgc
ggttcggaggaaatgtcatcagagcagcgcatgaaccacgagggccaatgggggccaggt
cagatgggccctcggcagcccccctacggccctggagggacgggcccgcccatgacccgc
accctacagtccaactaccaatctgctcaggccatgcagaaccacattccacaggtgtcc
agtccctcccccatgccccgcgggggccccatggagagccggacgtcgcccagtaaatct
ccctacatgcacagtggcatcaagatgcaaaaggcagggcccccggttcctgcctctcac
atagtgccccagtctgtgcagtcccctctgatccgtagagacatgccctttcccccaggc
tcagtggaggccacccaccccatcctaaaaccacgccgatgcctcacaacgaaagatatc
gggaccccagaggcttggagggtgatgatgtccctaaagtctggcctgttggctgagagc
acgtgggccctcgacaccatcaacatcctcctgtatgacgacaacagcatctccaccttc
aacctcaattcgctgcctggcctgctggagctggtggtggagtacttccggcgctgcctc
atcgagatctttgggatcttgcgcgagtacgaggtgggcgatcccggccagaggactcta
ctggaccctgacgccctgaaaagagactggagctgcatggaagatgaggaaccaggggtg
gaggacatgaaggtagaaggagaggatgaggaggatgatgacaatgaggaggaagaagag
gtggtggtgcagcgttcaaaacagccggccgggacgacaattgagggacaggctcaggtg
aagcaagaggatgagcaggagtcgtgctcagaacgggatactctgatagagaaggatgct
gaagataaggagaagagcttctctacctttgagcagcccagctcttcatcggacccccct
ggccttggcccggctaccccccaggagagacccaaacaggcaagcaagttcgacaagctc
ccactgaagatggtacggaagaaggacccgtttccagcaggcagggcaagccagagagga
aaagtgcaggagttcgacagtgggctgctccactggagcgccggcgggggagacagcaca
gaacacatccagacccactttgagaggagggaggaatttctggtcccacgagaacaagtg
ctggtcgtcccaacagccaaaaggaaaaggctaggaacagagatggtgggggacaaggac
aatgctacccccacagagaaagacaagcagaaaggtgggggagatcagaggccctcccag
ccatcatccacagagaaggcctcaacaacaaccgacacctcagccgacggtaaggaggga
aagtccgagcactcggacgctgagacagaggaaacgtcacagacggaagagccccagagc
cagcaggagaacgacaaaccgagtggccctcctcgtcaacaagttccccagcgtgtggtg
gaggacgagcctcacagcaaggacgagggcccactgcttacactggccaactggcaggac
gctctagcccgccgctgcgtctgcgtctccaacatcgtgcgcagcctctccttcgtgcct
ggcaacgaccaggagatgtccaaacaccctggcctcatgctgctgctgggtcgcctagtg
ctgctgcaccaccgccaccctgagaggaaycaggccccgctcacctacgagaaggaggag
gagtctgatgactgrcttggccagagggargaytggtggtgggactgcctgtcgctgttg
agggagaactgcctggtcactctmgccaacatctctggccagctggacctctccatctac
cccgagagcatctgccttccmctgctggacggcctcctccactgggcrgtgtgcccrtcg
gctgaggcccaygaccccttccccacgttggggcckcacagcgcaatgtckccccagaga
ctggtcrtggagacrctcagcaagctgagcatccaagacaacaatgtggacctggtcrtg
gccacgccgccgttgggtcggttagagaagctstatgggaccttggtgcggctggttggg
gagagaaaggtggccgtctgcagggagatgtcggtggtgttgttggccaacctggcccag
ggagacagcatggcagcgcgcgccattgccgtgcagaagggaagcgtgggtaacctcctg
ggcttcttggaggacagcctggcggccacccagctacagcagagccagagctctctgctg
cacctgcaggggatgcactttgagcccaccagtaatgacatgatgcggcgggcggcccgg
gccctgcacgccttagccaaggtggaggagaaccactcagagttcacactctacgagtca
cgcctccttgacctctcagtgtcacctctcatgaactcggtggtgtctcatgttatctgc
gatgtactctttctgattggccagtcatga
DBGET
integrated database retrieval system
