Salvelinus sp. IW2-2015 (Arctic char): 112079867
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Entry
112079867 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112079867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112079867
03036 Chromosome and associated proteins [BR:
salp03036
]
112079867
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112079867
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112079867
PBAF complex
112079867
GBAF(ncBAF) complex
112079867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
SWIRM-assoc_3
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
112079867
NCBI-ProteinID:
XP_024001447
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
NCLTRPTVFLVPDMEQKQANKLKDIIKRHQGSITEDKSKATHHIYPSSTQQEDEEWLRPV
MRKDKQVLVHWGMYPDSYDTWVSTSDVEGDVEDPPTSEKPWKVHAKWVLDTDAFNEWMNE
EDYEVDENKKTVSFRQRIFPKEERWRSHLPKTEEEEQGKAEVNRLIDSSEDNVXEQTHHI
IIPSYAAWFDYNCIHEIERRALPEFFNGKXKSKSPEIYLAYRNFMIDTYRLNPXEYLTST
SCRRNLTGDVCASTRVHAFLEQWGLVNYQVDAESRPSPWAPAHPPVVCKTLLTDTPSGLT
PMHHRPPQIPSGQQMLNFPEKGKDKPSDMQNFGLRNDLYSKKNPKSKGTSGGREWTEQET
LLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSESSLGPLAYQPVPF
SQSGNPVMSTVAFLASVVDPRVASAAAKAALGTCCGGW
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
aactgcctgactcgaccaaccgtgttcctggtgcctgacatggagcagaagcaggccaat
aagctgaaggacatcatcaaaagacaccagggctccatcactgaggacaagtctaaggcc
acccatcatatctacccctcatcaacccagcaggaggatgaggagtggctgcgtccggtc
atgcgtaaggacaagcaggtgctggtgcactggggcatgtacccagacagttatgacacc
tgggtgtccaccagcgacgtggagggggatgtggaggacccacccacctctgagaagccc
tggaaggtgcatgccaagtgggttctggacaccgacgccttcaacgagtggatgaatgag
gaagactatgaggtggacgagaacaagaagactgtgagcttccgccagaggatcttccca
aaggaggagagatggaggagtcacttgcccaagacggaggaggaggagcagggcaaggcc
gaggtcaaccgcctcatcgactccagcgaggacaacgtgnacgagcagacccaccacatc
atcatccccagctacgccgcctggttcgactacaactgtatccatgagattgagaggcgt
gcactgccggagttcttcaacggcaagnacaagtccaagtccccagaaatatacctggcc
taccgtaacttcatgatcgacacgtaccggctcaaccccnaggagtacctgacctccacc
tcctgccgcaggaacctgaccggagacgtgtgtgcgtctactagggtgcatgcgttcctg
gagcagtgggggctggtgaactaccaggtggatgctgagagccgaccctccccatgggcc
cccgcccaccccccagtcgtgtgcaaaacgctgctgacggacaccccctctggcctgacg
ccgatgcaccaccgccccccacagatcccctctggccagcagatgctcaacttcccagag
aagggcaaagacaagccctctgacatgcagaactttggcctgcgtaatgacctctactcc
aagaagaaccccaagagtaaaggaaccagcggcggccgygagtggaccgagcaggagact
ctgctcctattggaggctctggagatgtacaaagacgactggaacaaggtgtcggagcac
gtgggctcgcgcacccaggacgagtgtatcctgcacttcctgcgtctgcccatcgaggac
ccttacctggagaactctgagtcgtccctgggccccctggcctaccagcccgtacccttc
agccagtcaggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggacccc
cgtgtggcctccgctgctgccaaggcagccctgggtacgtgttgtgggggctgg
DBGET
integrated database retrieval system
