Salvelinus sp. IW2-2015 (Arctic char): 112080546
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Entry
112080546 CDS
T05762
Name
(RefSeq) splicing factor, proline- and glutamine-rich-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
112080546
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
112080546
03041 Spliceosome [BR:
salp03041
]
112080546
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112080546
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112080546
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112080546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
112080546
NCBI-ProteinID:
XP_024002110
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSRDRFNINVRGNNRGAGFQRRGAGPGGPMRGGMGNLNNFRQNQHPFQRGPHPGNFGKPP
NQIRPITPQKPLPPTISQPGAQPIRPPPTPGPALTMKGPVQQQQQAAAAAAAAAPPATAA
APPAPTVTTPAPAATPPVVAAAPPAVAAAPPKAAAAAPPKAAAXAPPKAAAAAPPKAAAX
TPPAAAAAAPSGQPKMLSPPPKPVPPKPEISSPPPNQMKKPAFSSPPPNQMKKPAFSSPP
PNQMNRNQQRAGPGNANGNGHKSAPFNKKPEPQTQNTSMEAEEAQHPKELRATLSSLRRP
GEKTYTQRCRLFIGNLPNDISDDTFKKLFAKYGEPSEIFINKNKGFGFIRLESRALAEIA
KAELDDVPMKGRPLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGVVERAVVIVDDRG
RSTGKGIVEFASKPAARKALDRCNDGVFLLTTSPRPIVVEPLEQYDDEDGLPEKLAQKNH
NYHKEREEPPRFARPGTFEFEYSKRWKSLDDMEKQQRQQVEKNIREAREKLEGEMDDAFH
VHQANMIRQDLLRREEELRRMEEMHSAEMQKRKEMQLRQEEERRLREEEMLRQREIEEQM
RRKREEAYRSGNFMDNRDMRMTQGGAMGMAVLLSLLENQFGSPNQKFPMGHQGMGGPSAG
GAMMPNEMRNERNFPQGGRGGLGPNNQGFGRVREEFDGPAKKARF
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggacagatttaacattaacgttagaggaaataaccgtggggctggatttcaa
cgccggggagctgggcctggtggtccgatgcgaggtggaatgggtaacctgaataatttc
agacaaaaccaacacccctttcaaagagggcctcatcccggtaactttggaaaaccaccc
aaccagatacgtccgataacccctcagaagcctctgccacctactatttcccagccaggc
gctcaaccgattcggccaccacctactcctggccctgcgctaaccatgaagggccccgta
cagcaacaacagcaggccgcggccgcagcagcagcagcagcacctccggcgaccgcagca
gcacctccggcgcccacagtaacgactccagcaccggcggcaacacctccggtggttgca
gcagcacctccggcggttgcagcagcacccccgaaagccgccgcagcagcacccccgaaa
gccgccgcaycagcacctccgaaagccgccgcagcagcacctccgaaagccgccgcagst
acacctccggcggccgcagcagcagcgccgtcaggtcaaccaaaaatgctgtcaccacct
ccgaagcctgttcctccgaaacccgaaatctcatctcccccaccaaaccaaatgaagaaa
ccagcattttcatctcccccaccaaaccaaatgaagaaaccagcattttcatctccccca
ccaaaccaaatgaataggaaccagcaaagagcaggaccaggcaacgccaatggaaatggg
cataaatctgcaccctttaacaaaaaacctgaacctcaaactcagaatacttcaatggag
gccgaggaagcccagcaccccaaggagttgagagcgacgttgtcatccctgcgcagacct
ggcgagaagacatacactcaacgatgccgccttttcattggaaatcttcccaatgatatc
tcagatgacacattcaagaagctgtttgcgaagtatggcgagcccagtgagattttcatc
aacaaaaacaaaggctttggcttcatacgcctggaatcccgtgcattggctgagatagca
aaagctgaactggatgatgtgcccatgaaaggcagaccgcttcgggtgcgctttgcaact
cactctgctgcactgtctgtgaagaacttgtcaccttttgtttccaatgagctactggag
gaggccttctcccagtttggagtggtagaaagagctgtggtaattgtagatgatcgcggg
cgctccactggcaagggcattgttgaatttgcctctaagcctgctgcacgaaaggccctg
gatcgttgcaacgatggcgtcttcttgctcaccacgtcacctcgtccaattgtcgttgag
cctcttgaacaatatgatgatgaggatggtctaccagagaaactggcacagaagaaccac
aactatcataaggagcgggaggagccgcccaggtttgcccgtcctggcacgtttgagttt
gagtactctaagcgctggaagtccctggacgacatggagaagcagcagcggcagcaggtg
gagaagaacattcgcgaagcccgcgagaaactggagggagagatggatgatgcgttccat
gtgcaccaggccaacatgatccgccaagatctgctgaggcgggaggaggaactacggcgc
atggaagagatgcacagtgcagagatgcagaagaggaaagagatgcagctcaggcaggag
gaggagcgtcgcctacgcgaggaggagatgcttcgccagagggagattgaggagcaaatg
cgccgcaagcgtgaggaggcctacagaagtggcaacttcatggacaatagggatatgaga
atgactcagggtggtgccatgggcatggctgtcctgttgtccctactagaaaatcaattt
ggctcacccaaccagaagttccccatgggacaccaaggcatggggggacccagcgctggm
ggagccatgatgcccaacgaaatgcgaaatgagcgaaacttccctcagggaggccggggg
ggactgggtcctaacaaccaagggtttggcagggtccgtgaggagtttgatgggcctgcc
aagaaggcccgcttttaa
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