Salvelinus sp. IW2-2015 (Arctic char): 112080649
Help
Entry
112080649 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4-like
KO
K06525
integrin beta 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04518
Integrin signaling
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112080649
04518 Integrin signaling
112080649
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112080649
09142 Cell motility
04820 Cytoskeleton in muscle cells
112080649
04810 Regulation of actin cytoskeleton
112080649
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112080649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
112080649
04515 Cell adhesion molecules [BR:
salp04515
]
112080649
04090 CD molecules [BR:
salp04090
]
112080649
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112080649
Exosomal proteins of bladder cancer cells
112080649
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin beta subunits
112080649
CD molecules [BR:
salp04090
]
Proteins
112080649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_Teneurin
PSI_integrin
FN3_DSCAM-DSCAML_C
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
112080649
NCBI-ProteinID:
XP_024002263
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MGRWTLNLLVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFDGPR
CDLYDNIVNHGCNSAVTAKSSMSMERNEQIDMLLKQSQVAPQEMSMTLLPGEEREIEMEV
FEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVSKLSDDYTIGFGKFVDKVVEPQ
TDMRPSKLAKPWPNSDPPFSFRHVITLTSDLRSFTEKLQKERISGNLDAPEGGFDAILQA
AVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPEGKYTEDTRQ
DYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNILEKA
FENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVGEQH
VCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTENAVRCTGHGDLVCGRCR
CYSGWLGPFCNCSASASTDPGTSCRGPGVEEPCSGRGDCLCGTCVCYNTDQYEGPLCQFD
KSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGICNGRGVCKCG
RCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDKCDQCQFKVVMVE
ELRENKEVIEACSFRDEDEDCTYHYTVDYPEDQTDKELEVQVLKKKDCPLLASCGLIPXI
MFLMLLLGLXLLCCWKYCACCKVLSTCLALLPWCERGRMVGFKEXQYMLRQSLLTSDHLD
TPXSEDRPAKSTDVVRWKITDNVHRSPNHPLAQVQPNPKRPVSVKYIFSEFVXIMFSHII
ITDIVLCFRLQRNAGKRADHAIVDTVLSAPRSSYPTXRQTDXENVQSGNFQDLKVVPGYY
TVATDRGLGGWCVEFQEGVEMVDVHVXLFVKEEDDDKKQLQVEAVDVPLGIAEIGRASXK
LCVSLSSSAKSVMSFLQPSYTYSRQDKVANIPITREIIEDGHAQVSYRTRDLTAKDKKDY
VTVDGELSYGPGETQQTVPVRLLEMGEGDGLLKDTQVKQFVMDLSNPRQGAKLGRYPRTT
VTITDKPEPSVVMFMKSTQNFSTADPTYSIPVVRTRNKEGPATVHWRTRNAKRFELSGPL
KFGPGETDKNIVIDPRSHPGPVKPESFQLELFDPSTKAVVGERKTTMVTITDGGLPDNAQ
MEKSAGFINQTATSPGGRLNSPTNVKAKATGPRSIRLNWDPVGKSLGYKVKHWIYGDPEA
DAPPAMNVKTTHADLANLYPYCDYETKVCGYNALGDGNYSDMVPCKTLEDVPSEPGRLAF
NVISPTVTQVSWAEPAETNGVITAYEVLYTPINDDTKPMGAAKKVKIDNPKKRMLLIENL
QSAQTYCYQVRAKNSVGWGPFKEATINLASQPTRPMSIPIIPDIPIVDAEAGDEYDGYLM
YSSEVMRSPTDSKRPSVSDEEPMNGRLEQNFLFPGGNNSMSRNMSSSSYSQVSPMSTLSS
SHRGGAGGSMSMESTTTYLSGQGGNSLSRTQVIGGGTRTENVVMRKRSENRGYYEYDDNI
RDSIIIGDLSSGLSGYTDGQNARLAPGVPDTPTRLVFSALGPTALKISWQEPHCERDVLG
YCVLYQLLNGGDVKRINMSSPADNSVVVQDLLPNHSYLFKVKAQSQEGWGPEREGVITIE
SAVDPNSPLSPMAGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILGYVVTCE
HLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIITIESQDD
GGTSQLGGLGGMTQLGGLGGMTQLGGLGGTSQLGGLGGMTQLGGLGGMTQLGGLGGTSQL
GGLGGTSQYSSQSLTKRDVYQLPTEGSTHTNVTHTMINDPYYSGDGMMMVGKTTQHTETS
GMVTRHVTKEVVQRSMQVAGTSSXTKKVERSFYET
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacattaaatctcttggtgggggttgtacttcttgctgtcctcacagcc
agttgctacgctgaaaaagtgaatcactgtctggctacgagggctagcacctgttcagaa
tgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgatggaccccgc
tgcgacctttatgacaacatcgtaaaccacggctgtaatagcgcggtgacagccaaaagc
agtatgtcgatggagagaaacgagcagatcgacatgctgttgaagcagtcccaggtagct
cctcaggagatgtctatgactctgctgccaggggaggagagggagatagagatggaggtg
tttgaaccagctaaaggacctctggacctctacattcttatggacttctccaactccatg
gaggacgatctggacaacctcaagagaatgggtgctgagctggcggcgttggtaagtaag
ctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtggaaccccag
acagacatgagaccatccaaacttgccaagccttggcccaacagcgaccctcccttctcg
ttccgtcatgtgatcactctgacctctgacctgcggtccttcaccgagaagctgcagaag
gagaggatctcagggaacctggacgctccggaggggggctttgacgccatactgcaggct
gcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctggtcttctcc
accgagtcggccttccactacgaggcmgacggtgccaacgtgctggcgggcatcatgcca
cgcaacgacgagcagtgccacctggaccccgaggggaaatacacagaggacaccaggcag
gactacccctctgtgcccaccctggtccgcctgctcggcaaacacaacattatccccatc
ttcgccatcacaaaccactcctttacctattatcagaagctttatgagtatttccccatc
gctgagttgggtctgctacaggaagattctgctaacatcctcaatatcctggagaaagcc
tttgagaatatccgttctaagatcagtatccgtgctgaggacaggcctaaagctatagaa
gctcaggtcctatcgtacagtggcagtgttgcgcaggctggaaccttcaaagtcaagcct
ggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggggagcaacat
gtgtgtagtctggagcagggtgacaagaaggggaagatgagagtcaaaccgacaaccttc
agcacagctctaaacatcaacgctgaagtgctttgtaaaacctgcgactgtgagaagacc
cccactgaaaatgcagtgcggtgtacaggccacggggacctggtctgtgggaggtgccgg
tgctacagtggctggttgggtccgttctgtaactgctctgccagcgcgtctacggatccg
ggcacttcctgtcggggtcctggagtggaggagccgtgttctggccgaggagattgcctg
tgtggaacgtgtgtttgttacaacacggaccagtacgagggacccctctgtcagtttgac
aagtcccagtgtcaacgatacggaggtttcctctgcaacgaccgtggtcgctgcttcatg
ggccagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaac
cagacctgtctggacactaaagggggcatctgtaacgggcggggtgtgtgtaagtgtggt
cgttgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaactttcag
gctcagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctggaagacc
ggkgagaagaaggacagcgacaagtgcgaccagtgccagttcaaagtggtcatggtggaa
gagctcagggaaaataaagaggtgattgaggcgtgtagtttccgtgacgaggatgargac
tgtacgtaccactacaccgtggactaccctgaggaccagactgacaaggaactggaagtc
caggtgctcaaaaagaaagactgtcccctgctggcttcctgtggtctgatccctnncatc
atgttcctcatgctactgctgggtctantgctgctctgctgctggaagtactgcgcctgc
tgcaaggtactgtccacatgtcttgctctactgccatggtgtgagagaggccgtatggtt
ggctttaaggagnaccagtacatgctccgccaatccctgctcacctctgaccacctggac
acgcccnntagtgaggaccggcccgccaagagcaccgacgtggttcgctggaagatcacc
gacaatgtgcaccgatcgcccaatcacccgctggcgcaggtccagccaaaccccaagaga
ccagtgagtgtgaagtacattttttctgaatttgtctaaatcatgttttctcatattatc
attactgatattgttttgtgtttcagattacagagaaatgctggtaaaagagctgaccac
gccatcgtagacaccgttctgtccgctcctcgctccagctacccaacanntcgtcaaact
gactgagaaaacgtccagtctggaaacttccaggatctcaaagtggtgccgggctactac
acagtggccacagacagaggtctaggcggctggtgcgtggagttccaggagggggtagag
atggtggatgtacacgtgncgctcttcgtcaaggaggaagatgatgataagaagcagctg
caggtggaggcggtggacgttcctctgggcatcgctgagataggaagagcttcctaaaaa
ctgtgtgtctctctctcctcttcagccaagagtgttatgtcgttcctccagccttcgtac
acctacagccgacaggacaaagtggctaacatccccattactagagagatcatagaggat
ggacacgcacaggtcagctaccgcacccgagacctcaccgccaaggacaagaaggactat
gtgacagtggatggggaactgtcctacgggccaggggagacccagcagactgtccctgtt
cgtttgttggagatgggagagggagatggtctgctgaaggacacacaggtcaaacaattt
gtcatggacctcagtaacccaagacagggtgcaaagctgggacgctaccccagaaccacc
gtcaccatcactgacaaaccagagcccagtgtggtgatgtttatgaagagcacccagaac
ttctccaccgccgacccaacctactccatccccgtggtccgcacccgcaataaggagggg
cccgccaccgtccactggaggacacgcaacgctaaacgcttcgagctgtccggcccccta
aagtttggtcccggggaaacagataagaacattgtgatcgatccacgctctcaccctggc
ccggtgaaaccagagtccttccaactggaactgtttgaccccagtacgaaagctgtggtc
ggagagaggaagacgacgatggtcactattactgatggaggacttccagacaatgcccag
atggagaagagtgcgggcttcatcaaccagacagccacgtctcctggtggtcgtctcaac
tctcccaccaacgtgaaggccaaagccaccggcccccggagcatccgcctgaactgggac
cccgtaggaaaatccctgggctacaaggtgaagcattggatctatggggatcctgaggct
gatgccccccctgcgatgaatgtgaagacaacccatgctgatctggccaacctgtacccc
tattgtgactacgagacgaaggtgtgtggctacaacgccctgggagacggaaactacagt
gacatggtgccctgtaagaccctggaggatgtccccagtgagcccggtcgtctggcgttt
aacgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagaccaatggt
gtcatcaccgcctacgaggtcctctacacgcccatcaatgacgacacgaagccgatgggt
gcagctaagaaggtgaagatagacaaccctaagaagaggatgttgctgattgagaacctg
cagtcggcccagacctactgctatcaggtccgggctaagaacagcgtgggttggggtccc
ttcaaagaagcgaccatcaacctggcctcccagcccaccagacccatgtccatccctatc
atcccagacatccctatagtggacgcggaggcgggggatgagtacgacggctacctgatg
tacagcagtgaggtcatgaggtcgccaacagactccaagagacccagcgtctcagacgaa
gaaccaatgaacggcaggttggaacagaacttcctcttccccgggggaaataattccatg
tcgcgcaacatgtcttcatccagctacagccaggtatctcccatgtccaccctcagctcc
agccaccgagggggggccggggggtccatgtccatggagtccaccacaacatacctctct
ggacaaggaggaaactctctctcccgcactcaggtgattgggggcgggacgcgcacagag
aatgttgtcatgaggaaacgatcagagaacagaggttactatgagtatgacgacaacatc
cgagattccatcatcataggagacctgtccagtggattgtctggatacacagatggccaa
aacgctcgtttggcccctggggtccctgacacccccaccaggttggtgttctctgccctg
ggccccactgccctgaagatcagctggcaggagccccactgtgagagggatgttttaggg
tactgtgttctctaccagcttctcaatggaggtgatgtgaagcgtataaacatgtccagc
cccgcagacaactccgtggtggtgcaggacctgctgcctaaccactcctacctgttcaag
gtgaaggctcagagtcaggaaggctggggaccggagagggagggagtcatcaccatagag
tcagctgtcgaccccaacagcccactcagcccaatggcaggttctcccttcactctcagt
acccccagtgctccaggccccctggtattcacagcgctgtcccccgaggcactgcagctg
agctgggagaaaccccgcaaacccaacggagacatcctgggctacgtggtcacctgtgaa
catctgcacggaggaggtgacatgcgttccttccaggtgagcggtgacagcgctgagacc
agtctgacagttccggacctgagtgagaacatgccgtacaagttcaaagttcaggccagg
acgacccagggcttcggccccgagagggagggcattatcaccatcgagtctcaggatgac
ggcggtacgtctcaactaggaggcctaggcggtatgactcaactaggaggtctaggcggt
atgactcaactaggaggtctaggcggtacgtctcaactaggaggcctaggcggtatgact
caactaggaggcctaggcggtatgactcaactaggaggtctaggcggtacgtctcaacta
ggaggtctaggcggtacgtctcagtacagcagtcagtccttgaccaagagagatgtgtac
caacttcctacagagggcagcacacacaccaacgtcacacacaccatgatcaacgaccca
tactactcaggagatggtatgatgatggtggggaagacgacccagcacacagagaccagc
ggcatggtgactcgtcatgtgacgaaggaggtggtgcagaggagcatgcaagtggccggc
accagcagcytcaccaagaaggtcgagaggtcattctacgagacctga
DBGET
integrated database retrieval system
