Salvelinus sp. IW2-2015 (Arctic char): 112080709
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Entry
112080709 CDS
T05762
Symbol
tp53bp1
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112080709 (tp53bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
BRCT
DUF4537
RTT107_BRCT_5
Tudor_5
Motif
Other DBs
NCBI-GeneID:
112080709
NCBI-ProteinID:
XP_024002316
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MILPFCGLQASEDQDPKGDDSELLSSQEDLFNTDKTGTGVDSTMSEPENEGVPTXDPAHT
LRLLHLSGQGTLVQGSLSQNSVDFVAXTQENLSQTPFIVPNSPTGQENELGADEPMDTSM
PPEDQSDGKEEEPMDMDPAPKSHPSASTPVSQNSPGFVLERTLSLPTQPEFSHDVFVPTQ
SQEAGSSSIAPQETHSRKVTSSSSQPTALDSSSPKMAAAPAQSKAPTTTDREQSVTDSFQ
LELSVNTQSCSLAQQASMQAGGKDVEEDSQATQIEEGLDGPLQIDTSDSVISRNSQKRES
NGVPSDPKTPAIXPKVPQVPDLLKTSGESTRREECNTSQKSDTHKQTTLNVRNVNIGDDG
INVTKTDSSQKQDAKASSPSPSSQQKLETIDLFTPSSCVQETPSSSNSAPCSLASLSQSQ
SQSVFSQMSHVGSVKALSPSPGVCVDSRRDGGGRREAGGGVGSPTSSQKNRDPSKSIQSL
SQERGGTATNSPKEKNKADEEEEEGMEEGGEKQQDSTLGPEGSGLYLSLSQSQVLSPEPM
EEEEEEKRGKFSVSHSRSEGGGGEEESCSSIIVLEESERSSQLLEKEVKSPSNMGTSQPV
ASRRGSVSSYGTGSQLKDTQLVPIGLAQVEKEGSREAEGLRDKSLSDSSGGERIPFHFTL
PKEGELIGPPVSAXPPLISQLKQTPRHSTPLVDMTSFSEKSAAVGDVSTETAMATSEITA
GESGEDTAEGADGKLSLRMKLVTPVEEGSSERFSLQKPPQSDEEGSVSKVTTVVKAVTRG
ELFSSPSQQKSSQRPSIPSPSLECISLPNSQSEPLSSPRQEVKRTLPLAQRERASSEPST
PGRPAVKTPQKGTAAGDRGPCGPPEPSTPTRAAAIRQRAVSQQTSFDNTVSPSSPVSFVR
EWRFSRPVLKRLAPGLQQPALGSLGEPETPPSRAAAGPAHQRHVRTIXEVRTTVTRIITD
VYYEDGREVRVRSLMESEEPVVEPAVLDSDISLCRTGSSMTSGDLGDVSSLSSKASSLQH
SSGGTSIVTGPAQRGPDFIMPPSRGPKSASPRRGSGPQQRGHRGQPAGSEFMGERVQGLH
GSRAFTPLTPRGRARRGRPPSRSPLSRSLHPPVSHPAHPRQPSCPQPLSTSLLTTTSQDE
GSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGEGVTGLLFDDSYECEVTGKDILLCDPI
PLDTEVTALLEDEYFSTGRVKDYKKEGEDLFYSVEKQGQTTAVEREGQTTSHYSCREGGP
DYSHYSCREGGQTTATTAVERQWYSRSSVILPWNKANRLREQYGLGPYEPSTPLAKASDI
SLDNLVRGRGDAGDHRRGQPLTLWRLYVSIHSFLSTGQRVGVCKHSGSGTDLPWDHSDLA
ETHGPLPQSASLFLGFXFMLTASSESDRQTNQPISDGEEGEKYVQTAPYHKRYTETQLEA
GAGFILHDFNEEQCKAAYQSLLITDQHSRTRKYLLCVAXGVPCVSHIWVRDCCKEGKLLN
YRTXLLPAGVGPDERIVEWHPRCSPFKALRVLLVFGEPAELWSELLMMNGASSVRQHQAE
KDSSDIPVGKFDVVVTDRTCPPLVLKSVTSQEVPMVSPEWLIHSLICGERLGYHSNPQYR
HDYTSSS
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgatactgcccttttgcggcctgcaggcctccgaggaccaggatcccaaaggggacgac
tctgagctgctgtcctctcaggaggacctcttcaacactgacaagacaggcacaggggtg
gacagcacaatgtcagagccagagaacgaaggcgtgcccaccnctgaccccgcccacacc
ctgcgtctgctgcacctctctgggcagggcaccctggtgcaggggagcctctctcagaac
tctgttgactttgtagcacycacccaggaaaatttgagccaaacaccttttattgtcccc
aattcaccgacaggacaagaaaatgaactgggtgccgacgaaccaatggacacgtctatg
cctccggaggaccaatcggatggcaaggaggaggagccaatggacatggacccagctcct
aagtcacacccctcggcatccaccccagtatcccagaactccccaggttttgtgttggag
aggaccctctctctgcctacccagcctgagttctctcatgatgtatttgtcccaacccag
agtcaagaggctggaagcagtagcatagctccacaagagacgcacagcaggaaagtgaca
tcatcatcatcccaacccacagcactggattcaagctcacccaagatggccgctgcaccc
gcccagtccaaagcacccacaacaactgaccgagaacaatctgtgactgattctttccaa
ctggagctgtctgtgaatactcagagctgtagtctggcccagcaggcttccatgcaggct
ggggggaaggatgtcgaggaggacagtcaggctacacagatagaagaaggtctggacgga
cccctacagatagacaccagtgactctgtgatttcacgtaacagccagaagagggaaagt
aacggggtyccctccgacccaaaaacacctgctattttkccaaaagttcctcaggtgcct
gacttgctgaagactagcggggaaagtaccaggagagaggaatgtaacacttcacagaag
tctgacacgcacaaacagacaaccttgaatgtacgcaacgtgaatataggtgacgatggt
atcaatgtgaccaaaacagatagttctcagaagcaggatgccaaggcctcttccccctct
ccctcctcccaacagaagcttgaaaccatagacttattcacccctagcagctgtgtgcag
gagacgccttcttcctcgaatagcgctccctgtagtttggcctccctgtctcagtctcaa
tcccagtctgttttctcacagatgtctcacgtgggctcagtgaaggctctctcgccgagt
ccaggtgtttgtgtagactccagaagagatggaggaggaaggagagaagcaggaggggga
gtgggaagcccgacgagctcacagaaaaaccgggacccgtctaaatccatacagtcttta
tcgcaggagcgtggaggcactgctaccaacagcccaaaggagaaaaacaaagcagatgaa
gaagaggaagaagggatggaggaggggggagagaagcagcaggacagcacgttggggccc
gagggctcaggcctctatctgtctctctctcagagccaggtrctttctccagagcccatg
gaggaagaagaggaggaaaaaagagggaagttctctgtctcgcactccaggagcgaggga
ggaggaggagaggaggagagctgcagcagcatcattgttctggaggagagcgagaggagc
tcccagctactggagaaggaagtgaagtcgccgtcgaacatgggcacgtctcagccagtg
gcaagccggcgggggtcagtgtcgtcctatggcacagggtcacagctgaaggacacccag
ctggtaccaatcggacttgcccaggttgaaaaggaagggtctagggaagcagaggggctc
cgagacaagagcctcagtgacagctctggaggtgagagaattccattccacttcactctc
cccaaagaaggcgagctgattggccctcctgtgagtgccnatccccctctgatcagccaa
ttgaagcagacaccgagacacagcactccattggtggacatgacttccttctctgagaag
tccgcggcggtgggtgacgtttccacggagacggcgatggcgaccagcgaaatcacggcg
ggggagagtggcgaggacacggccgaaggggctgatgggaaacttagtttgcggatgaag
ctggtgacccctgtggaggagggcagctcagaacgcttcagcctgcagaagccaccgcaa
tcagacgaggaaggctctgtctccaaggttaccaccgttgtcaaggctgtaaccagaggg
gaactgttcagctcaccctcacagcagaaaagctcccaaagaccctccatcccctctccc
tccctggaatgcatcagcctccccaacagccaatccgagcctctctccagcccccgccag
gaagtgaagcgtacgttgccattggctcagagagaaagagcctcctctgaaccatccacc
ccaggccgtccagcagtgaaaacaccacaaaaaggcaccgcagctggagatagagggccg
tgtgggcccccggagccatccacccccaccagagccgctgccatcagacagagggccgtg
tcccagcagacaagctttgacaacaccgtctctcccagttcaccagtaagctttgtcaga
gagtggcgtttcagcagaccagttttgaagcggctggccccaggtctccagcagccagca
ttagggtccttaggcgagccagagaccccaccctcgagggcagctgctggtcccgcccat
cagagacacgtgcggaccattncagaagtgaggacgacggtcacacgcatcatcacagac
gtgtactacgaggacgggagagaggtgcgcgtaaggtcactgatggagtcggaggagccg
gtggtggaaccagccgtgttggacagcgacatctctctgtgtcgcaccggcagctccatg
acctccggtgacctgggtgatgtcagctctctgtcctccaaagcttccagcctgcagcac
agctccgggggcaccagcatagtcacaggccctgcccagaggggccccgactttatcatg
ccgcccagccgagggcccaagtctgccagccccaggagggggagtgggccgcagcagagg
ggccacaggggtcaaccggcagggtcagagttcatgggagagagagttcaaggactccat
gggtcgcgggccttcaccccattgacgccccgcggaagagccaggaggggcagacctccg
tcccgctcacccctgtccaggtccctacacccgcctgtgtcccaccccgcacatcccaga
cagcccagctgtccccagccactctccacgtctctcctcaccaccacttcccaagatgaa
ggcagcccagctgggagcagcttcgtggggcttcgcgtggtggccaagtggtccagcaac
ggctacttctactcaggccgcatcaccaaggacctgggcgagggcgttaccgggctgctc
ttcgatgacagctatgagtgcgaggtcacgggcaaggacatcctgctgtgcgaccccatc
cccctggacactgaggtcacggcactgctggaggacgagtacttcagcacaggtcgagtg
aaggactacaagaaggagggcgaggacttgttctacagtgtggagaagcagggccagact
acagctgtagagagggagggccagactacaagccactacagctgtagagagggagggcca
gactacagccactacagctgtagagagggaggccagactacagccactacagctgtagag
aggcagtggtacagccgcagctctgtcatcctgccatggaacaaggcaaacaggctgaga
gaacagtacggcctggggccctacgagccctccacacccctggccaaggcctctgatatc
agcctggataacctggtgaggggaagaggagacgcaggggatcacaggaggggccagccc
ctcaccctgtggcgtctgtatgtgtccatccattcatttctctccacaggtcagcgggtt
ggtgtgtgtaaacactcaggcagtggcaccgacctgccctgggaccatagtgacctggcg
gagactcacggcccgctgcctcagagtgcatctctcttcctcggctttngcttcatgctg
accgcatcatcagagagcgaccgccagaccaaccagccaatcagcgatggcgaggagggt
gagaagtatgtgcagacggccccctatcacaaacgctacactgagacccagctggaggcc
ggagcaggcttcatcctccacgacttcaacgaggaacagtgcaaggcggcctatcagagc
ctgctgatcacagaccagcatagccgaaccaggaagtacctgctgtgtgtggcangtggc
gtgccgtgtgtgtctcacatctgggtgagggactgttgcaaggagggcaagctgctcaac
tacagaactnncctgctgcccgccggagtgggccctgacgagcgcatagtggaatggcat
ccgcgctgcagcccgtttaaggccctgcgggtcctgttggtatttggggagccrgcggag
ctgtggtctgagctgctgatgatgaatggagcttcctctgtgagacagcaccaagcagaa
aaggacagctctgacattccagtgggcaagtttgacgtggtggtcacagaccgtacctgt
ccgccattggttctgaagagtgtgacatcacaggaagtacccatggtgtcgcccgagtgg
ctaatccacagtctgatctgtggggagcgcctgggataccatagcaacccccaatatcgt
catgactacacatcctcatcytaa
DBGET
integrated database retrieval system
