Salvelinus sp. IW2-2015 (Arctic char): 112080812
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Entry
112080812 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: lisH domain and HEAT repeat-containing protein KIAA1468 homolog
KO
K26154
RAB11-binding protein RELCH
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
112080812
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112080812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PPP2R1A-like_HEAT
LisH
tRNA-synt_1_2
Motif
Other DBs
NCBI-GeneID:
112080812
NCBI-ProteinID:
XP_024002499
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MAAGSVNPFNLSDSEDEAEQRPEDGVDAERSLSDGAPGLPSNNPFSPQADAEPXALLLSS
TRTSPSVEGISAADAAMASGLAETRVSVDVIAAQLIRDQYILTALEFHTELLESGRELPR
LRDYFSNPGNFERQSGTPPACKDQGLGPGGPLNRAGSISTLDSLDFARYSDDGNRESDER
VAVLEFELRKAKETIQALRANLTQAAESDTQERNKNYKSDPEIQELIRPLEKRALNFLVN
EYLLKNEYKLSAITFSDENDDQDFELWDDVGLNIPKPPDLLQIYRNCGSALPSXRDTXDV
SVGVESGELTGNYIVQKPDLLQQQQTEMVEEFEYQISLLNKEKQSLXDQVKKLQSEIQSL
RRTVSPPPPDQGSHLNSLSSSSTPPPPQPPLDNGQYLDIRRASEPDKPHTXSNPPTQTVS
SPTHTSTQPHAKLKCRGTVVFDQPNRKLSPAFQQALLSFCKMSADSRLGAEVSRIADNEE
SVMLMLGRCLPHIVPNVLLAKRERMVAHLCQELIPLILCTACLHPEPKERDQLLHILFNL
IKRPDDEQRRMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYSERRLLVAEACGALAP
YLPKEIRSSLVLSMLQQMLAEDKADMVREAVVKSLAIIMGYIDDPDKYSQGFELMLLSLG
DPSERVVSAIHQVFIPAFAAWTTELGILQTTLFPSLLARIEKLLKQGEHGLDEHKLHMFL
SALQSLIPPLFSVVIQNAPFTHRLTLQGDIPPIESERFPRPASPLQDVATVVGSREXLSG
LLILYDYQLEHEGTTGWDSMLWVVNQLLPQLIEIVGRITVTSTTCVHEFSRFFWRLCRTF
GKIFTNTKVKPQFQEILRLSEENVDALTGNAVLIKATVPVYATGVLTCYNQDEDRKLLVG
FLEDVMTTLSLSHAPLDSLKASFIELGCDLSAVLSNQLLVKGVNETLVAQRVVPALITLS
SDPEISVRISTIPAFGTIMETVTHKELLERVKMQLASFLEDPXYQDQHSLHMEIIRTFGR
VGPNTEPRFRDAVCAPPPHKLALITNAQATERKRIDIATQLVXGYSALSCCFISEELMVN
HFLPGLRCLRTDMEQLSPEHEVILSSMIKEGETKVENRGIGQAEGSVSIAASLVGEDAKT
KFLSKMGQLTTSGAMLANVFQRKK
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtagcgtcaacccgtttaatctgagcgattctgaagatgaggcagagcag
agaccagaggacggggttgatgccgaaaggagccttagcgatggagcgccagggctcccg
tccaacaaccccttctccccgcaggcggacgccgagccccyggcccttctgctgtccagc
acccggaccagcccaagtgtggaaggcatctcggcagcagatgccgcaatggcaagcggc
ttggcagagactcgggtatctgtagatgtgattgctgctcagctaatacgggatcaatac
atcctcaccgctcttgaatttcataccgaattgttggagtccgggagggagcttccccgg
ttgcgggattatttctccaacccgggcaatttcgagaggcaaagcggcactccaccagct
tgtaaagaccaaggactggggccaggtggaccgctaaaccgagcgggcagcatcagcacg
ttggactctctggacttcgcccgttactctgacgacgggaaccgggagtcggacgagagg
gtggcagtgctggagtttgagctacggaaagccaaggagaccattcaggctctacgcgcc
aacttgactcaggcagcagagagtgacactcaggagagaaacaagaactacaaatcagat
cctgagattcaggaacttatccgcccactggagaagcgagccttaaattttcttgtgaat
gaatatttattraagaatgagtacaaactgtcggccatcacattctctgatgaaaatgat
gaccaggactttgagttgtgggacgacgtgggcctgaacattccgaagcctcccgaccta
ttacagatctacaggaactgtggctccgcccttccgtcgcyacgggatacagyggatgta
tccgtgggggtggagtcaggcgagctcactgggaactacattgtccagaaacctgatctc
ttgcagcagcagcagactgagatggttgaggagttcgagtatcagatcagtctactgaac
aaggaaaaacagagtctgrctgaccaggtcaagaaactacagagtgagatccaaagcctg
agaaggacagtgtccccccctcctcctgaccagggctcacatctcaactccctctcctcc
tcatccacacctccccctccccagccccccctggacaacggtcagtacctggacatcagg
agagcctcagaacctgacaagccccatactgasagcaacccccccactcagaccgtcagt
tcccctacacacacctctacacaaccccatgccaagctaaagtgcagagggacggtggtg
tttgaccagcccaacaggaagttgtcaccagcgttccagcaggccctgttgtccttttgt
aagatgtcagctgacagtcgtctgggggcagaggtgtcgaggatagcagacaatgaggag
agtgtgatgctgatgttgggtcgctgtctccctcacatmgtccccaatgtcctcctggcc
aaacgagagagaatggttgcacacctgtgccaggagttgattcctctcatcctgtgtacg
gcgtgtctccacccggagcctaaagagagagaccagctccttcacatcctcttcaatctc
atcaagagacctgacgacgaacagaggcggatgatcctaacaggttgtgtggcgtttgcc
agacatgttggtcctaccagagttgaggctgaactcctaccacaatgctgggaacagatc
aaccataagtattcagagagaaggttgttggtagcagaggcctgtggagccttagcacct
tacctgcctaaggagatacgtagttccctggtgttgtccatgctgcagcagatgctggct
gaagacaaggcagacatggtcagagaggccgtggtcaaaagcctcgctatcatcatggga
tacatcgatgaccctgacaagtactcccagggttttgagttgatgttgttgtccctcggt
gacccatccgagagggtggtcagtgctatccaccaggtgttcatcccagcattcgctgcc
tggaccacagagctgggaatcctccagaccactctcttcccctctctgctggcccgcata
gagaaactactcaagcagggtgaacatggtcttgatgaacacaagctccacatgttcctg
tcggccctccagtctctcatccctcctctgttctctgtggtgatccagaacgctcccttc
acacacaggctcaccctgcagggagacatcccccccatagagagtgagcggttccctcgg
ccagcgtctcctcttcaggatgtggcgactgtcgtgggcagccgggagncgctgagcggc
ctcctcatcctctatgattaccagctagaacatgagggcaccacaggctgggacagtatg
ctgtgggtggtcaatcaacttcttccccagctgatagagatagtaggtcgtattactgta
acctccactacgtgtgtccatgagttctcacgcttcttctggagactctgccgcacgttt
ggcaagatcttcactaacactaaggtaaaaccacagttccargagatcctacggctctct
gaagagaatgttgatgctttaaccgggaatgctgtcctgatcaaggctacagttccagtc
tatgctacaggtgtactgacatgctacaatcaggatgaggatcgtaagctgctggttggt
tttctagaggacgtcatgacgaccctgtctctctcccacgcccccctggacagcctcaaa
gcctccttcatagagctggggtgtgacctttcggctgtgttgtccaatcagctgctggtg
aagggggtgaatgagacgctggtggctcagagggtggtgcccgctctcatcactctctcc
agcgaccctgaaatttcagttaggatatctactatccctgcctttggtaccatcatggag
acagtcacacacaaagagctgttggagcgtgtgaagatgcagctagcgtcgttcctggag
gacccancgtaccaggaccaacactctctacacatggagatcatcaggacctttggccgg
gtcggacccaacactgagccacgcttcagagacgcagtttgtgctcccccaccccacaag
ctggcgttgataacaaacgctcaggctacagagaggaagaggatagacatcgctactcag
cttgtttgaggctacagcgctctctcatgctgcttcatctcagaggagcttatggtgaat
cacttcctgcctggcctgaggtgtctgaggacggacatggaacagctatctcctgaacac
gaggtgatcctgagctccatgatcaaggagggggaaacgaaggtagagaacagagggatt
ggacaggctgagggatctgtgtccatcgctgccagtctggttggggaagacgccaagacc
aagttcctgagtaagatgggtcagctgaccacgtccggcgccatgctggccaacgttttc
cagagaaagaagtga
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