Salvelinus sp. IW2-2015 (Arctic char): 112080850
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Entry
112080850 CDS
T05762
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112080850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112080850
03016 Transfer RNA biogenesis [BR:
salp03016
]
112080850
03012 Translation factors [BR:
salp03012
]
112080850
04131 Membrane trafficking [BR:
salp04131
]
112080850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
112080850
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112080850
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112080850
Translation factors [BR:
salp03012
]
Eukaryotic type
Elongation factors
112080850
Membrane trafficking [BR:
salp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112080850
Exosome [BR:
salp04147
]
Exosomal proteins
Proteins found in most exosomes
112080850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112080850
NCBI-ProteinID:
XP_024002551
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPTYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgag
aagttcgagaaggaggctgctgagatggggaagggctcatttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatctcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggacttcatcaag
aacatgattactggaacctcccaggcggactgtgcagtgctgatcgtggcggccggcgtg
ggtgaattcgaggcgggcatctcaaagaacgggcagacccgcgagcacgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataaaatggactccactgagccc
acctacagccagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
atcggctacagcccggatatggtagcctttgttcctatctctggctggaacggagacaac
atgctagaggccagtcctaacatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtctcgc
cccaccgacaagcccctccgcctgcccctgcaggatgtctacaagattggaggaattggc
acagtgcccgtggggcgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaaccgaagtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctggctatgccccggtg
ctggactgccacaccgcccacatcgcttgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggggatgccgcc
atcgtggatatggtcccggggaagcccatgtgtgtggagagcttctctgagtaccctcca
ctaggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gttgagaagaaagccccctccactggcaaggtcaccaagtccgcccagaaggcccagaag
accaaatga
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