Salvelinus sp. IW2-2015 (Arctic char): 112080945
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Entry
112080945 CDS
T05762
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
salp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112080945
03015 mRNA surveillance pathway
112080945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
112080945
Enzymes [BR:
salp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112080945
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112080945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
112080945
NCBI-ProteinID:
XP_024002658
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MSADSWAQAVDEQEAAAESIGSLQIKDKPEENGTANTALATTTTTTTTTTNTAAASATTP
AKTGGEGDKTGEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEEL
RLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVD
PNNKFPQALCVSPTYELALQTGKVIEQMGKHYSEVKLVYAIRGNKLPRGTQLQEQVVIGT
PGTMLDWCLKFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKQCQMLLFSATF
EETVWNFAQRIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITIAQAM
IFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGI
DVEQVSVVINFDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLNKIQD
HFNKKIEKLDTDDLDEIEKIAG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagactcctgggcccaggctgtggacgagcaagaagccgccgcggaatcgatt
ggtagcctacaaatcaaagacaagcccgaggaaaatggtactgccaacactgcattggcg
acgactacgacgacaacaacaacgacgacaaacacagcagcagccagcgctacaacgcca
gcaaagaccggaggagagggagacaaaacaggggaggaggacgataaagatgacaaggcg
gcacagtcgttattgaataagttgatacgcagtaatctagtgaacacaaccaatcaagta
gaagtcctacagagggatcccaactctccgctttactctgtcaaatccttcgaggagcta
cggcttaaacctcagctgctccagggagtgtacgccatgggcttcaaccgaccctccaaa
atccaagagaacgcattacccatgatgctcgctgaacccccacagaacctgatagcccag
tctcagtcrgggacggggaagactgctgcctttgtcctggccatgctcagtcatgtggat
cccaacaacaaattcccacaggctctctgtgtgtctcctacctatgagctggccctgcag
acggggaaggtcattgagcagatggggaagcactactcagaggtcaaactagtctacgcc
atcagaggaaacaaactgccgagaggtactcagctccaggagcaggtcgtgatagggacg
ccaggcaccatgctggactggtgtctgaagttcaagttcatcgaccccaagaagatcaaa
gtgtttgtcctggacgaagctgacgtcatgatcgcaacacagggtcatcaggaccagagt
atacgcattcagaggatgctacccaaacagtgccagatgctgctattctcggccacattt
gaggagacggtgtggaactttgcccagcgcatcgtcccagaccccaacatcatcaagctg
aaacgggaggaggagacgctggacaccatcaagcagtactacgtcctctgtaacagcaaa
gaggagaagttcatggccctctgcaacatctacggagccatcaccatcgctcaggctatg
atcttctgtcataccaggaaaacggcggggtggttggcaggggagctgtcccgggaggga
caccaggtggcgctgctcagtggtgagatgcaggtggagcagagagctgctgtcatcgac
cgcttccgagacggaaaagagaaggtcctggtcaccaccaacgtctgtgccagaggtatt
gacgtggagcaggtttccgtggtgataaactttgacctgccggtggacagagacggtaac
ccggacaacgagacgtacctgcatcggattggccgcacgggtcgttttgggaagcgggga
ttggccatcaacatggtggacagcaggttcagcatgaacgtcctaaacaagatccaggat
cacttcaataagaagatcgagaagctggacacagatgatctggatgagatagagaaaatc
gccggctga
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