Candidatus Syntrophocurvum alkaliphilum: SYNTR_0232
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Entry
SYNTR_0232 CDS
T06326
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03420
Nucleotide excision repair
salq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SYNTR_0232
03430 Mismatch repair
SYNTR_0232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_0232
Enzymes [BR:
salq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNTR_0232
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNTR_0232
MMR (mismatch excision repair)
Other MMR factors
SYNTR_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QGT98825
UniProt:
A0A6I6DBP7
LinkDB
All DBs
Position
227011..229095
Genome browser
AA seq
694 aa
AA seq
DB search
MNILDNLNEQQQQAVLHINGPCMVLAGAGSGKTRVLTRRIANLIDNGVLPNSILAITFTN
KAAQEMRSRVAAMIPDYAGQWIQTFHAACYKILRMDIEKIGYNKNFSIIDDTEGKTLIKG
ILKEENDYETKPEDILYSIKFVKNGLINAENYYKNINAPQHVKEKYYRLYRIYNARLKEL
NALDFEDLIGLCIRLFKEHPDVLEKYQQWFKYIMIDEYQDTNYAQYLWANLLADKNKNIC
IVGDPDQSIYSWRGAEPYNIKRFLKDYPETKVIKLEVNYRSTRLILEAANSVIKNNQDRE
EKNLYTANGQGDKIVHFCAGDSYQEAKFIADAISELIEREGKKYSDCAIFYRTHAQSRLL
EDSLLYKYIPYRIIGARKFYERKEVKDIIAYLKVICNYSDLISFRRIINVPRRGVGDKTL
EKIEEYAAVNEINLLDSLAYSTSIPGISKKMGDKLEDFHGMIKYFSTLADANMPLKELID
QVLDMTGYIEDLKKSKLTDIESRIENIQEIKSLAVEFEAEGGEGLEDFLAQIALVQDTDD
LDHSDAVSLMTYHGAKGLEFPVVFMTGMEEGVFPSYRTETAEEMEEERRLCYVGITRAQE
RLYLTNTISRLLYGFERNNPPSRFLKEIPDELLRLPSERVIKKEILSEGDKVAHRKFGIG
FITKITDDEIAIIDFDRAGVKMLRLDIAPLEKIS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacttgataatttgaacgagcaacagcaacaagctgttttacatattaatggg
ccttgtatggtgttagccggagccgggagtgggaaaactcgtgtgctaactaggaggata
gccaaccttattgataatggtgttttacctaattcgatattagctataacatttactaat
aaagcagcacaggaaatgaggagtagggtggctgctatgattccagattatgctggtcaa
tggattcaaacctttcatgcggcatgttataagatattaagaatggatattgagaaaatt
ggctacaacaaaaacttttctattattgatgatactgaaggaaagactcttataaaaggc
attttaaaagaggaaaatgactatgaaactaaaccagaggatattctttattcaattaag
tttgtaaaaaacggcttaattaatgctgagaactattataagaatataaatgctccccaa
catgttaaggagaaatattataggctttatagaatttataatgctaggttaaaagaatta
aacgctttagattttgaagacttaattggactatgtattcgcttatttaaagaacaccct
gatgttttagaaaaatatcagcaatggtttaaatatataatgatagatgagtaccaagat
acaaactatgcacaatatctatgggctaatttattagcagataaaaataaaaatatatgt
attgtaggtgatcctgaccagtctatatatagctggaggggagctgaaccatataatatt
aaaaggttcttaaaggattatcctgaaactaaagttataaagttagaggtaaattatcgc
tcaactagactgattttagaggctgcaaattcagtaattaagaataatcaagatagagaa
gaaaaaaatttatatactgcaaatggacaaggtgataaaatagttcatttttgtgcaggt
gatagttatcaagaagcaaagtttattgcagatgcaattagtgaattaatagaacgtgaa
ggcaaaaaatacagtgattgtgctatattctatagaacacatgcacagtcacgtctttta
gaggattccttgttgtacaagtatattccttaccggattattggggctaggaagttttat
gaaagaaaagaagtaaaggatataattgcctaccttaaggtgatatgtaactatagtgat
ttaattagctttagaagaataattaatgtaccacgtagaggtgtaggggataaaacccta
gaaaaaatagaagaatatgctgctgtaaacgaaataaatttattggattcacttgcatat
tcaacttcaatacctggaataagcaaaaaaatgggggataaactagaagattttcatgga
atgataaaatatttttctacactagcagatgctaatatgccattaaaagaactaatagat
caagttttagatatgactggttatatagaagatttgaagaaaagtaaattaactgatatt
gaatcgagaattgaaaatatacaagagataaaatcccttgcagttgaatttgaagcagag
ggtggagaaggcttagaagattttctagcccagattgcattagtgcaagatacagatgat
ctagaccattcagatgcagtatctttaatgacttatcatggagcgaaaggtctagagttt
ccagtagtgtttatgacaggaatggaggaaggagtttttccatcttatcgtacagaaact
gcagaggagatggaggaagagagaaggttgtgttatgttggtattactcgtgctcaagaa
cgtctttatttaacgaatactatatctagattgctttatggtttcgaaagaaataatcct
ccttcaagatttttaaaagaaatcccagacgaactacttcgcttacctagtgaaagggta
attaagaaagagattttaagtgaaggggacaaggttgcgcatcgaaaatttggaattgga
tttattactaaaataactgatgatgaaatcgctattattgattttgaccgtgctggtgtg
aaaatgcttcggttagatattgctcctttggagaaaataagctaa
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