Candidatus Syntrophocurvum alkaliphilum: SYNTR_0626
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Entry
SYNTR_0626 CDS
T06326
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNTR_0626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salq03019
]
SYNTR_0626
03016 Transfer RNA biogenesis [BR:
salq03016
]
SYNTR_0626
Enzymes [BR:
salq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SYNTR_0626
Messenger RNA biogenesis [BR:
salq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SYNTR_0626
Transfer RNA biogenesis [BR:
salq03016
]
Prokaryotic type
tRNA degradation factors
SYNTR_0626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
DUF6842
OB_RRP5_4th
DUF3015
Motif
Other DBs
NCBI-ProteinID:
QGT99219
UniProt:
A0A6I6DI25
LinkDB
All DBs
Position
626436..628547
Genome browser
AA seq
703 aa
AA seq
DB search
MHTYKIEIGGRQLVVEVGKVAKQANGAAVMRYGDTVVLVTATASKEPREGIDFFPLTVDY
EERLYAAGKIPGGFIKREGRPTEFATLSARLIDRPLRPLFPNGYRNDVNIVATVMSMDND
NIPDVISIIGASVALTTSNIPFSGPVAAVTVGLVDGEFIINPTVEQSEKTKMHLTVAGTK
DAIMMVEAGADEIPEDQMLDAIFYGHEEIKKIVEFQEKIIAEIGEEKIEPKLIDDDPEIE
AAVRDFATQKLEQAVRNENKKARESDIDEVKSITKEHFQEIYPEQMNEVKSVLEKILKEV
VRKMTIYENERVDGRKNDEIRAVTCEVGYLPRPHGTGLFTRGQTQVLSITTLGSMREEQI
LDGLGADESKRYIHHYNFPPWSVGEARPMRGPGRREIGHGALAERALLAVLPSEDEFPYT
IRVVSDVLESNGSTSMGSVCGSSLSLMHAGVPIKATVSGIAMGLVKEGEDFAILSDIQGI
EDALGDMDFKVAGTKDGITALQMDIKITGVSREIIEKALAQANDGRMFIMSKMLECISEP
NKQLSPYAPQMIRMQINPDKIREVIGAGGKTIQKIVAETDCKIDIEDDGSLFIISIDEES
ANKAKSIIETIIAEVEVGKTYMGTVKRIMDFGAFVEIIPGVLGTQGKEGLVHISQLAEER
VNKVKDVVNIGDQIMVKVIEIDQQGRINLSRKAALNKVAKPTN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
ttgcatacttataaaattgaaatcggtggaagacaactagtagttgaagtaggaaaggtt
gctaaacaagcaaatggtgctgccgtaatgagatatggcgatactgttgttttggttaca
gctacagcatccaaagaacctcgtgaaggtatagacttttttcctttaacagttgattat
gaagaaagattatatgcagctgggaaaattcctggtgggtttataaaaagagaggggaga
ccaacagagtttgccacactttctgcccgattaatagatagaccactaaggcctttattt
ccaaatggatatagaaatgatgtaaatatagtagcaacagttatgtcaatggataacgat
aatattcctgatgtgatttccattattggggcatcagttgcgcttactacttcaaatata
ccatttagtggtcctgttgcagctgtaacagttggcttagtagacggtgaatttatcatt
aatccaacagttgaacaatctgaaaagacaaaaatgcatttaacagtagcaggaactaaa
gatgctatcatgatggttgaagcaggtgcagatgagattccagaagaccagatgcttgat
gctatattctatgggcatgaagaaattaaaaagatagtagaatttcaagaaaaaattata
gctgaaattggggaagaaaaaattgaaccaaaactaatagatgatgacccagaaattgag
gctgctgttagagattttgccacacaaaaattagaacaagctgtaagaaatgaaaacaaa
aaagcaagagaaagcgatatagacgaggttaagtcaataacaaaagaacattttcaagaa
atatatccagaacaaatgaatgaggtaaaatcagtattagaaaaaatcttaaaagaagta
gtaagaaaaatgactatctatgaaaatgaaagagtagatggaagaaaaaatgatgaaata
agagcagtaacatgtgaagtaggttatctgccgagacctcatggtacaggtttatttacc
cgtggacaaactcaagttctttctataactacattaggttcaatgagagaagagcagata
cttgatggtttgggtgcagatgagtcaaaaagatatatccatcattataatttcccacct
tggagtgtaggtgaagcaagaccaatgcgtggaccgggtagaagagaaataggtcatgga
gctcttgctgaacgtgctttattagctgtactaccttctgaagatgaatttccatatact
atacgcgtagtatcagacgttttagaatcaaatggttcaacctcaatgggaagtgtttgt
ggtagttccttgtcattaatgcatgctggtgttccaattaaagcaacagtatcaggtatt
gcaatgggtcttgtgaaagaaggagaagattttgcaatattaagtgatatacaaggtata
gaagatgctttaggggatatggatttcaaggttgcagggactaaagatggtataactgca
ttacaaatggatataaaaataacaggtgtaagtcgtgaaattattgaaaaggcattagct
caagctaatgatggaagaatgtttattatgagtaaaatgctagaatgtatttcagagcct
aataaacaattatcaccttatgcacctcaaatgataagaatgcaaattaatccagataaa
atacgcgaggttataggtgctggtggaaaaactattcaaaagatagttgctgaaacagac
tgtaaaattgacatcgaagatgatggcagcttatttatcatatcaattgatgaggaatca
gctaacaaagcaaaaagcataatagaaacaataattgcagaggttgaagtaggaaagact
tacatgggtactgttaaaagaataatggattttggtgcttttgttgaaataattcctggt
gtcctaggtacccaaggcaaagaaggcttagttcatatatctcaacttgcagaagaaaga
gtaaataaagtaaaagatgttgtaaatataggtgatcagataatggtaaaggtaatcgaa
atagatcaacaaggaagaataaacttatctagaaaagcagcattaaacaaggtggcaaaa
ccaacaaactaa
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