Candidatus Syntrophocurvum alkaliphilum: SYNTR_0843
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Entry
SYNTR_0843 CDS
T06326
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SYNTR_0843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_0843
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SYNTR_0843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QGT99436
UniProt:
A0A6I6DDX3
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Position
complement(833103..835667)
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AA seq
854 aa
AA seq
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MTIQYTPMIQQYLEIKERYQDAILFFRLGDFYEMFFEDAKIAAKELEIVLTARDGGSNKI
PMCGVPYHSVNNYIHKLINRGYKVAICEQVQDPKDAKGIVKREVTRVITPGTILEDYMLD
ESENNYLAAVVEYEQKFGLSYIDITTGDFWVTEYSGDNAYLEIENEILRIFPSECLISSP
NTLIKDTKFENIISTNFNNVDYIEDFEQAKQVIKDHYKAEITEELNTNYSSTCIMSIAVI
IKYLSETHKRSLKHIKQVKFYKESMFVELDFVTRKNLELIYNMKERKKDGTLYNIIDKCC
TAMGKRNLKKWIEQPLKKIDDINKRLDAVEELRNNLILRTDTKKLLESIYDLERLVGRIG
ADIANPKDLLALKNSINKLPELADLYSSTHSEYLTKIAELDILDEISSFIENSINDDAPV
IIKEGDIIKKGFNSEIDELRKLKEQGSQWLIEYEQKEKSKTGIKNLKVSFNKVFGYYLEV
SKSNLHLVPDDYIRKQTLANTERYITEELKDFETKIITSKDKLFELEYKIFLQIRQKISE
NTSRIQKTAAQIAILDTLYSMSETAYINDYIRPQLNSEGTIEIKAGRHPVVEKTLANARF
VPNNVDLNMDDSRFLIITGPNMGGKSTYMRQIALLVIMTQIGCFIPAEYANIGIVDKIFT
RVGASDDLASGQSTFMMEMTEVANIINNSTKNSLIILDEIGRGTSTYDGLSIARAVGEYI
HENIGAKTLFATHYHELTSLADEFEGMVNLCVSVLETGDQVVFLKKVLPGKADKSYGIDV
AKLAGLPKEVIQRSNDILVHLENTNYYEYKQDITQLSLFNDDENIVVKEIKKINPDDITP
KEALNLLYRLKGLV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
gtgactattcaatatacccctatgatacaacagtatttagaaataaaagaacgatatcaa
gacgctattctctttttccgtttaggtgatttttatgaaatgttttttgaagatgctaaa
attgccgcaaaagaacttgagatagtattaacagcaagagatggtggatcaaataaaatt
cccatgtgtggtgtaccatatcattctgtaaataactacatacataaattaattaatcgt
ggctataaagttgcaatttgcgagcaagttcaagatccaaaagatgcaaaaggaatagtg
aaaagagaagttactagggttataactccaggaactatattagaagattatatgttagat
gaatctgaaaataattatttagccgctgtagtagaatatgaacaaaaatttggcctatca
tacattgatataacaacaggtgatttttgggttacagaatattcaggtgataacgcatat
ttagaaatagaaaatgaaattttaaggatttttccttcagagtgcttgattagttctcct
aacactttaataaaagatacaaagtttgaaaacataatatcaactaattttaataatgta
gattatattgaagattttgaacaagccaaacaagtcataaaagaccattataaagcagaa
ataacagaagaactaaatacaaattatagttctacctgtattatgtctattgcagtaata
attaaatatttaagtgaaacacataaaagaagtctaaaacacattaaacaagtaaagttt
tataaggaaagtatgtttgtcgaattagatttcgtaacccgaaaaaatctcgaattaatt
tataatatgaaagaaagaaaaaaagacgggactctatataatataattgataaatgctgt
acagcgatgggaaaacgaaacttaaaaaaatggattgaacaaccattaaaaaagattgat
gatataaataaaagacttgatgcagttgaagagcttagaaacaatttaattttacgaact
gataccaaaaaattactagaatcaatctatgatttagagagattagtggggcgtattgga
gctgatattgctaaccctaaggacttgttagcattaaaaaattcaattaataagttgcct
gaattagcagatttatattctagtacacattcggaatacttaacaaaaatagcagaatta
gatatcttagacgaaatttcttcttttatagaaaattctattaacgatgatgcacccgta
attataaaagaaggagatataattaaaaaaggatttaattctgaaatagatgaacttcgc
aaattgaaggagcaagggagtcaatggttaatagaatatgagcaaaaagaaaaaagtaaa
acaggaattaaaaacttaaaagtaagttttaataaggtttttggatattatctagaagta
agtaaatcaaatctccatcttgttccagatgattatattaggaaacaaacactagcaaat
acagaaagatacataacagaagaacttaaagattttgaaacaaaaataattacttctaaa
gataaactttttgaattagaatacaaaatctttttgcaaatacgtcaaaaaataagtgaa
aatactagtagaattcaaaaaacagcagcacaaattgctatactagatacattatattca
atgtctgagacagcgtatataaatgattatatacgtcctcaattaaactcagaaggaact
atagaaattaaagctggtagacatccagttgtagaaaaaactcttgctaatgctcgattt
gttcctaataacgttgatttaaacatggatgattctagatttttaataattactggtcct
aatatgggtggtaaaagtacatatatgcgtcaaatagccttgttagtaataatgacacaa
ataggctgttttattcctgctgaatatgccaatattggtatagttgataaaatttttaca
cgtgtaggtgcatcagatgatttagcatcaggacaaagtacctttatgatggaaatgact
gaagttgcaaatattattaataattctacaaaaaacagtttaattattcttgatgaaatt
ggtagagggacaagtacttatgacggattaagtatagctagagctgtaggcgaatatatt
catgaaaatattggtgctaaaacactctttgctactcattatcatgaattaacttctctt
gctgatgaatttgaaggaatggttaacttatgcgtttctgtgttagaaacgggggatcaa
gttgtgtttctgaaaaaagtcctaccaggaaaagctgataagagctatggaatagatgtt
gctaagcttgcgggtttacctaaagaagttatccaacgttcaaatgatatattagtacat
ttagaaaatactaattattatgaatataaacaagatataactcaattaagtttatttaat
gatgatgaaaatatagtagttaaagaaataaaaaaaataaatccagatgatattacccct
aaggaagctctaaaccttttataccgtttaaaaggtttggtttaa
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