KEGG   Candidatus Syntrophocurvum alkaliphilum: SYNTR_0954
Entry
SYNTR_0954        CDS       T06326                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
salq  Candidatus Syntrophocurvum alkaliphilum
Brite
KEGG Orthology (KO) [BR:salq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:salq02048]
    SYNTR_0954
Enzymes [BR:salq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SYNTR_0954
Prokaryotic defense system [BR:salq02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SYNTR_0954
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QGT99547
UniProt: A0A6I6DEF5
LinkDB
Position
complement(941521..944307)
AA seq 928 aa
MNKLSLAAQNLWAKKSYNDGMMLWLPLMIHMKDSAVVAERLWNCWLSKGVKNIISAGTGG
EEQAEKLFVFLAAIHDLGKATPVFQVKLTHPLCRELDEQIEEKLKIAGVPLRPYHEFSYA
AKTPHALATQILLQNAGCNKNVASVLGAHHGKPTNHSTLNTCGVESYGFNYHLGKEGKEA
WTSVQNELTEYALKLAEFPSMKDIPHPNMISQVLLSGLLVMTDWIASNEDYFPYIRLEDS
IASLQTDKRIKRAWKQLSLSNPWEADNTWMNSDLYQERFGFVSTGLQKTVIKATGDINTP
GILVLEAPMGVGKTEAALACAEVFAEKTNRQGVFFALPTQATSDGIFPRLKSWISYLDRE
AGYTISLAHGKAQFNEEYQSLKIFEGSTNINYDEEGGVLVHEWFEGQKKSMLADFVVGTI
DQLLLASLKQKHLMLRHLGLANKVVVIDECHAYDAYMGQYLNRALNWLGAYGVPVIVLSA
TLPAEKRQSVIDAYLNEDNLPKQSNDPLAGNKSFFKEPPSWAQSRGYPLMSYTDGVQVRQ
EILPTDGSTRNVKLGFLAEETLLEKLEELLSDGGCVGILVNTVKRAQVLAEELRIRFGEE
NVKLLHSRFLAPDRAEKERVLMQELGKPGTGNKRPALRIVVGTQILEQSLDIDFDLMITD
LCPIDLLLQRIGRLHRHIRARPSKLKKAQCFIMGVDGENFESTTEIIYGKYLLMRTKALL
PQELTLPNDIPELVQDVYDENVALSQKANGYDEAEKKWKEVIADKEKRAKDFRIGPAWQD
SPQNLVGWMDTDISEQQGEATVRDTDESIEVILIQEKNGGRLYFLSETEEGREIPLYEVP
GHELARALARQRVRLPNILCMPWSIEKTISELEKYNSIKISQWQQSPWLKGELALILNES
FTAKLGNYCLTYHQQEGLSYEKEEAVDA
NT seq 2787 nt   +upstreamnt  +downstreamnt
ttgaacaaactttctttagcagctcaaaatctttgggcaaaaaaatcctacaatgatggg
atgatgttgtggttgccattaatgatacatatgaaagacagtgctgtggtagcagaacga
ctatggaattgctggctatccaaaggagtcaaaaatataattagtgctggaacaggagga
gaagaacaggcggaaaaactttttgtgtttttggcagcgattcatgatttgggtaaagca
acgcctgtttttcaagtaaaattaactcacccgctatgtcgagaattagatgaacagata
gaagaaaaactcaagattgctggtgtacctttgaggccttatcatgagttttcctacgcg
gctaaaacgccacatgctttagcaacgcaaatcttgctacaaaatgccggatgcaataag
aatgtagcatctgtgttgggcgcccatcatggaaaaccaaccaatcatagtacattaaat
acgtgtggtgtggaatcttatgggttcaattatcatcttggaaaagaaggtaaggaagcc
tggaccagtgttcagaatgaattgacggaatatgctttaaaattggctgagtttccaagt
atgaaagatatcccccatcctaacatgatctctcaggtattgttgagcggtctgctagtg
atgacagactggattgccagcaatgaagattatttcccctatattcgcttagaggattct
attgcctctttacagacggataaacgcattaagagggcgtggaaacagctatctttatcc
aatccatgggaagcggataacacatggatgaacagcgatctctatcaggaacgttttgga
tttgtgtctaccggattgcaaaaaactgtgataaaagcaacaggtgatattaatactcca
ggcatattggtattggaagctcctatgggagtcggaaaaacagaagcggctctggcttgt
gctgaagtatttgctgaaaaaacaaatagacaaggtgttttttttgcccttcctacccaa
gcaacctctgatggcattttccctcgcttaaagagttggatcagctacctagaccgggaa
gcaggctacaccatcagtctggctcatggcaaagcacagtttaatgaagaataccagtct
ttgaaaatattcgaaggcagcaccaatataaattacgatgaagaaggcggcgtacttgtg
catgaatggtttgaaggacaaaaaaaatccatgttggccgattttgttgttggaaccatc
gaccaacttttactggcttccctcaaacaaaaacacctgatgcttagacatttgggattg
gctaacaaggtggttgttattgatgaatgtcacgcttatgatgcctacatgggtcaatat
ctgaatagagctctaaactggctaggagcctatggcgttccggttatagttctttcagcc
accttgcctgcagaaaaacgacagtcggtgattgatgcctatcttaacgaagataacctt
cccaaacagtccaatgaccctttggcaggtaataaatccttctttaaggaaccgccatca
tgggcgcaaagcaggggatatcccctaatgtcctataccgatggggttcaagtgaggcag
gaaatattaccgactgatggctcaacacgaaatgttaagctgggttttctcgcagaagaa
acattgttggaaaagctggaggaacttctgtctgatggtggatgtgtagggattttggtc
aataccgttaaacgagcgcaagtcttggcagaggaacttagaattaggtttggagaagaa
aacgtgaagttgcttcattcccggttccttgcaccggacagagctgaaaaggagcgagtg
ttaatgcaggaactggggaaacccgggacggggaataagcgcccggcactccggattgta
gtaggcactcagatattggaacaatccttggatattgatttcgatttgatgatcacagac
ctttgtccaatagatttactgttacagcgcatcggacgtcttcatcgacacataagggca
cgaccatcaaaacttaaaaaagcccaatgttttatcatgggagttgatggtgaaaatttt
gaatcaaccactgagataatctatggcaaatatttgttgatgcgtacgaaagcactgttg
ccacaggagttaacgcttcccaatgacatccctgaactagtgcaggatgtgtatgacgaa
aacgtcgctctttctcaaaaagcaaatggttatgacgaggccgaaaagaaatggaaagaa
gtgatagcagacaaagaaaaacgagccaaagactttagaataggtcctgcatggcaagat
tctccgcaaaacctggtgggctggatggacaccgatatatccgaacaacaaggtgaggca
actgtcagagatacagatgagtcaatagaggtaattctgattcaggaaaaaaacggcggt
cgtttgtattttttgtccgagacagaggaggggcgagagatacccttatatgaagtgccc
ggccacgaactggcacgtgccctagccagacaaagagtacgtctgcccaacattttatgc
atgccgtggtctattgaaaaaaccatatcagaattagaaaaatacaacagcataaaaatt
tcccaatggcaacaatctccttggttaaagggtgaactggctctgatccttaatgaatca
tttacagctaaactgggaaattattgtttaacttatcatcagcaggaaggactaagttat
gaaaaggaggaggctgtggatgcttga

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