Candidatus Syntrophocurvum alkaliphilum: SYNTR_1252
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Entry
SYNTR_1252 CDS
T06326
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq00900
Terpenoid backbone biosynthesis
salq01100
Metabolic pathways
salq01110
Biosynthesis of secondary metabolites
salq03010
Ribosome
Module
salq_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SYNTR_1252
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SYNTR_1252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
salq03011
]
SYNTR_1252
Enzymes [BR:
salq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SYNTR_1252
Ribosome [BR:
salq03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SYNTR_1252
Bacteria
SYNTR_1252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
S1_RRP4
L_biotic_typeA
Motif
Other DBs
NCBI-ProteinID:
QGT99845
UniProt:
A0A6I6DAX5
LinkDB
All DBs
Position
complement(1269806..1271728)
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AA seq
640 aa
AA seq
DB search
MAENSSEKPNKWYSYGPIVHNESVVEYLKNKGISSINDLNEIESGGIIIRSHGVPPELIN
QAEIKGYNIIDATCPLVKKVHDTAKLLKNEGYIIVVFGDIKHPEVVGIVGWAGENVYVVK
NKEEAKDISVKGKVGVIAQTTKDEIEFYEIVSTILPKTEELRVFNTICSATKKRIQAARN
LAKEVELMFVIGDKQSSNTNTLTKECINSGVKTYQIESASDIKKDWLKGITKIGVTAGAS
TPDWIIKEVLDVMNDEKNVELGKEEQAMNNNEENFANLEAEMADFESPDKGDIIKGTVIQ
VLNDEVMVDVGGKSEGIVPLRELTNKQDVSSAKEIAKVGDELEVLVLKWDDDGTILLSKK
KVDARKALDKLEEDYKEDNIVEGTVINTVKGGLLVDLGVVAFLPASHIEDGYVKDVTNYL
NKTLKFKIIEFNRNKKRGSQIVLSRKKLVEEEKNKAKEEFWSNVNEGEVRTGKVKRLVDY
GAFVDIGGYEGLLHVSELDHVRVEHPKDILNEGDEIEVYILNLDREKERVSLSRKKLLKS
PWEIVLEKFNEGEIIEGKVVRIAPFGAFVEIIPGVDGLVHISQLANRRVAKTEDVVNVDQ
KINAKILSIDSEQKKVSLSIKEAENDVERNEVDEYLENQE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatagttcagaaaaaccaaataagtggtatagctacggaccaatagtacat
aatgagtccgtagtggaatacttaaaaaataaagggataagctctattaatgatttaaat
gaaattgaatctggtggaataattataaggtcacatggagtacctccagaattgataaat
caagctgaaataaaaggctataatattatagatgcaacttgtccgttagtaaaaaaagtt
cacgatactgctaagttattgaaaaatgaaggttatataatcgtagtttttggtgatata
aaacaccctgaggttgttgggatagtcggttgggctggagaaaatgtatatgtagtaaag
aacaaagaggaagctaaagatatttcagtaaaaggaaaagtaggtgttatagcacaaact
accaaggatgagatagaattttatgaaatagtctcgactatactccctaaaactgaagaa
ttacgagtgtttaatactatttgttctgctacaaaaaagagaattcaagcagcacgcaac
ttagctaaagaagtagaattaatgtttgtaataggagataaacaaagttcaaatactaat
accctaactaaagaatgtattaatagtggagtaaaaacttatcagattgaatctgcttca
gatataaaaaaagattggttaaagggtataactaaaataggagttactgccggggcttca
actccggattggataattaaggaggtattggacgtgatgaacgacgagaagaatgtcgag
cttggaaaagaagaacaagccatgaataataatgaggagaattttgctaatctagaggca
gaaatggcagactttgagtctcctgataaaggggatattatcaaaggtactgttattcaa
gtgctcaatgatgaagtgatggttgatgttggtggaaaatctgaaggaatagtaccatta
cgtgagttaaccaataaacaagatgtatcctcagcaaaagaaattgctaaggttggggat
gaactagaagtattagtattaaaatgggatgatgatggcaccattttattatctaagaaa
aaagttgatgctagaaaagcattagataaactagaagaggattacaaagaagataatata
gtagaggggacagtaattaacacagttaaaggtggacttctagtagatttaggagttgtt
gctttcttgcccgcatctcatatagaagatgggtatgtaaaagatgtaactaactatcta
aataaaacattaaaatttaaaataatagaatttaaccgtaacaagaaacgtggttctcaa
atagtactatcacgcaaaaaactagtagaagaagaaaaaaacaaagcaaaagaagaattt
tggtcaaatgttaatgaaggtgaagtacgtacaggcaaagtaaagcgcttagtagattat
ggtgcttttgtagacataggtggttacgaaggattactgcatgtatcagaattagatcat
gtaagagtagaacatcctaaagatatattaaatgaaggcgatgaaatagaagtatacatt
ttaaacctagatcgagaaaaagaaagagtatcattgagtagaaaaaaactactgaaaagc
ccatgggaaatagttttagaaaaattcaatgaaggtgaaattatagaaggtaaagtagtt
aggatagctccttttggtgcatttgtagaaataataccaggagtagatggattagtgcat
atatctcagttagctaatagaagagttgcaaaaactgaggatgttgtgaatgtagatcaa
aaaattaatgccaaaattttatcaatagattctgaacaaaaaaaggttagtctttccatt
aaagaagcagaaaatgacgtagaaagaaatgaagtagatgaatatcttgaaaatcaagag
tag
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