Candidatus Syntrophocurvum alkaliphilum: SYNTR_1587
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Entry
SYNTR_1587 CDS
T06326
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03030
DNA replication
salq03410
Base excision repair
salq03420
Nucleotide excision repair
salq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYNTR_1587
03410 Base excision repair
SYNTR_1587
03420 Nucleotide excision repair
SYNTR_1587
03440 Homologous recombination
SYNTR_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salq03032
]
SYNTR_1587
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_1587
Enzymes [BR:
salq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYNTR_1587
DNA replication proteins [BR:
salq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SYNTR_1587
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SYNTR_1587
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNTR_1587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QGU00181
UniProt:
A0A6I6DJ27
LinkDB
All DBs
Position
complement(1625418..1628024)
Genome browser
AA seq
868 aa
AA seq
DB search
MMSDKKLMLIDGNSLLYRAFYALPLLHNREGIYTNGVYGFLTMYNRIVEQEKPTHIVVAF
DMDKKTFRTERFVDYKANRSAPPDELTPQFQLLRDVLKALKVKYIEVPGFEADDIIGTIS
KIAETQGVSSIIVTGDGDNLQLVSDSVKVLMTKKGITDIQLYDINKVIEKWEVPPEKMIE
IKALMGDSSDNIPGVPGVGAKTAIKLIKQFNKLENIYENLDQVSGKKLKERLAENRDKAF
LSRELAEIVRDMDLDIEIDEFQKSEPDYENLIQIYKRLEFNNFLATLNKKAGSTAKELEK
IDVIELECEEDVEKLIKQISKDDLLSLYFKTDYHHPMWCNLKSIYIEFRKQVYSLNIGEK
INYKISWLKPFFEAKDIKKLIHNQKFVQVLLSRYGIQLRGIECDTMLLTYINDSQIQNES
LSNVILQYLNVTVTEDNPECLVIKIQDLYQVLIKDLPQDLKYLLYNVEIPLSNTLGKMEI
AGIKVNKKILETISEEFSIRLSKDEERIYELAGGSFNINSPKQLGKVLFEDLGLRVVKKT
KTGYSTGAEVLEELYDEHEIIPYILDYRHVSKLKSTYVDALQELIHVDTGRVHTIFKQAL
TTTGRLSSVEPNLQNIPIKMEEGRRIRNAFTAKDDWYLISADYSQIDLRALAHISEDATL
IETFKKGIDIHTRTASEIFNVDISDVNSDLRRRAKAVNFGIVYGISDFGLSRDTGVSRKE
AKRYIEEYLDSYPGVRQYMDNIVEFGKKHGYVETVLKRRRYLPDLNAKNKMVQSFAKRMA
LNTPIQGSSADIIKLAMLKINDEIETRKLKSQLLIQVHDDLLLEVPKEEIEETTAIVKEA
MENAYSLKVPLEVSLNIGRNWYEMEEWK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgataaaaaattgatgctaatagatgggaatagcctattgtatagagctttt
tatgcgcttccacttttgcataatagagaaggtatatataccaacggggtatatggtttt
ttaactatgtataataggatagttgagcaagaaaaaccaacccatatcgtagtagccttt
gatatggataagaaaacatttagaacggaaaggtttgttgattataaagctaataggtct
gctccccctgatgaacttactcctcagtttcaattgctaagggatgttttaaaggcactt
aaagtaaaatacattgaagttccagggtttgaagcagatgatataattggaaccataagt
aaaatagcggaaactcaaggtgtgagtagtattatagttactggtgatggtgataatctt
cagttagtttctgattcagtaaaagtcttaatgactaaaaaaggtattacagatatacag
ttatacgatataaacaaagtgatagaaaagtgggaagtaccaccagaaaaaatgatagaa
attaaagctttaatgggggattcatctgataatatacctggtgttccaggagtaggcgca
aaaactgccataaaacttattaaacaatttaataagttagagaatatttatgaaaattta
gaccaagtaagtgggaagaaactaaaagagagattagcagaaaatagagataaggcattt
ttaagtcgtgagctagctgaaatagttagagatatggatttagatattgaaatagatgaa
tttcaaaagagtgaaccagattatgaaaatttaattcaaatatacaaacgattagagttt
aataattttttagcgactttaaacaagaaagccggatcaacagctaaggagcttgaaaaa
atagatgtaatagagcttgaatgtgaagaagatgtagaaaaacttataaagcagataagt
aaagacgatttactatccttatattttaaaactgattatcatcaccctatgtggtgtaat
cttaaatcaatatatatagagtttcgtaaacaagtgtatagcttaaatataggagaaaaa
attaattataaaatttcctggttaaaaccattttttgaagctaaagatattaaaaaactt
atccacaaccagaagtttgtacaagtattgttgagtagatatggtatacagcttagaggt
atagaatgtgacaccatgcttcttacttatattaatgattctcaaatacaaaatgagtct
ttaagtaatgtgatattacaatatcttaatgttactgttacagaagataatcccgagtgc
ttagttataaaaattcaggatttatatcaagtattaatcaaagacttaccccaagattta
aagtacttattatacaatgtagaaataccattatcaaatactttggggaaaatggaaatt
gcaggaataaaagtgaataaaaaaatactagaaaccatatctgaagaattttcgattaga
ctttctaaagatgaagaacggatatatgaacttgcaggtggaagtttcaatattaactca
cctaagcaattaggaaaagtgctattcgaagatttaggtttaagggtagtcaaaaaaaca
aagactggctactctacaggagctgaagtattagaagaactatacgatgagcatgagata
ataccttatattttagattataggcatgtaagtaagctcaaatcaacatatgttgatgca
ttacaagagcttattcatgttgatacgggtagagtacataccattttcaaacaagctcta
actactacaggcagactttcaagtgttgaaccaaatttgcaaaatattcccattaaaatg
gaggaagggcgcagaataagaaatgcatttactgccaaagatgattggtacttaatatct
gccgactattctcaaattgatcttcgtgcactagcacatataagcgaggatgcaacacta
atagaaacgtttaaaaaaggtatagatatacacacacgtacagcctctgaaatttttaat
gtagatatatctgatgttaattcagatttaagacgtagagctaaagcagttaactttgga
attgtttatggtataagtgattttggtctatctagagatacaggagttagtagaaaggaa
gccaaaaggtatatcgaggaatatctagactcctatccaggagtacgacaatacatggat
aatatagtggagtttgggaaaaaacatggttatgttgaaactgttttaaaacgtcgtaga
tatttacctgatttaaatgctaaaaataaaatggtacagtcttttgctaagagaatggct
cttaacacaccgatacaggggagctcagctgatataataaaactagctatgctaaaaata
aatgatgaaatcgaaactagaaaactgaaatcacagctattaatacaagttcatgatgac
ttactgctagaagttcccaaagaagaaattgaggaaactacagctattgtaaaagaagct
atggaaaatgcctatagcttaaaggtgcctttagaagtatccttaaatataggacgtaat
tggtacgagatggaagaatggaaataa
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