Candidatus Syntrophocurvum alkaliphilum: SYNTR_1596
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Entry
SYNTR_1596 CDS
T06326
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03030
DNA replication
salq03430
Mismatch repair
salq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYNTR_1596
03430 Mismatch repair
SYNTR_1596
03440 Homologous recombination
SYNTR_1596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salq03032
]
SYNTR_1596
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_1596
Enzymes [BR:
salq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYNTR_1596
DNA replication proteins [BR:
salq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYNTR_1596
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYNTR_1596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
DUF655
APP1_cat
Motif
Other DBs
NCBI-ProteinID:
QGU00190
UniProt:
A0A6I6DDI1
LinkDB
All DBs
Position
complement(1635947..1639339)
Genome browser
AA seq
1130 aa
AA seq
DB search
MGKGFVHLHNHSEYSLLDGACRIKDLVTRAVELDMPAVAITDHGVLYGAIDFYKEANNQG
IKPIIGCEVYVAPRTRFDKEAKIDDNLYHLVLLCKDNAGYKNLVELVSKSYLEGFYYKPR
VDSDLIKEYSEGLIALSGCLAGEIPQKILAGNYEEAKETALFYQEIFGEENFYLEIQDHG
LEEQKIALRGIYKLSEELNIPLVATNDIHYINRNDSSVHDVLLCIQTGKVVDDEQRMRFY
GSEFYMKSLEEMSELFPNYPEAMVNTLKISEKCNVKFDFGSFFLPHFDIPKEHTAESYLS
EIVWQRFYDRYPSPDKELINRVDYELNILNSMGFAAYFLIVQDLVNWSRENGVPVGPGRG
SAAGSLVSYILDITTVDPIKYDLIFERFLNPERVSMPDIDIDFCFEKRDKVIDYIVEKYG
ANRVAQIITFGTMAARAAIRDVGRALDIPYGEVDKIAKMIPAELGVTINRSLEISPELIE
AYENDYNTRRIIDIAKAIEGMPRHASIHAAGVVIGNQPLSTILPLQKTTDGHVITQFSKE
TVEEIGLLKMDILGLRTLTVLDRALDIIEKTRGIRVNIDSVEMDDPKVYELISAGKTVGV
FQLESDGLRRILTEMKPNRFEDLVAVIALYRPGPLGSGMVEDFINRKHKRQETEYIHPML
EEVLEETYGVILYQEQVMKIANDLANFTMGEADILRRAMGKKKPQELVTQRDKFVKAAKE
NNIPENTSNRLFDNMESFAGYGFNKSHSAAYAVISYQTAYLKAHYPAEYMCAFLTSVIDH
QDKVVFYLQECKLLGISILPPDINESFENFTVSKDGIRFGLGAIKNVGFNAVKNIVETRK
KEHFTSLYDFCRRVDLSIINKRTVENLILAGCFDSLGISRKQNLSIMEECINLAIAIQQT
ENSNQLTLFGEEASQIDEPKPTVSGEMDIYDKLSREKDVLGFYVSENPLDRYKNILDLVT
TCSINELNNSNEEAYVRVAGLAVNLVKRISKKGENYARFILEDLTGRMDMFLFPSAYKEY
INSIQPDTILIIEGFFDNREDQPKIAVRKAYPIVDKVKELNIRISPDLSDANHKEKLINI
LKKHPGNAGVLVHLSSKRRIVLDEKYNVASSIELKKELIDIYGKNNIWFL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagggtttgtccatttacataatcactcggaatatagtcttttagatggtgct
tgtagaataaaagacttagttactcgtgcagtagagttagatatgcctgctgtagcaatt
actgatcatggtgtactatatggagctatagatttttataaagaagccaataatcagggg
ataaagcctattattggttgtgaagtatatgttgctcctcgtactcgctttgataaggaa
gctaaaatagatgataatttatatcatttagtattattatgcaaagataatgcagggtat
aagaaccttgtggaattagtaagtaaatcttatttagaaggcttttattataaacctcga
gttgatagtgacctaataaaggagtatagtgaaggtttaatagccttaagtggctgttta
gcaggtgaaatccctcaaaaaatattagcaggcaactatgaagaagccaaagaaacagca
ttattttatcaagaaatatttggtgaagaaaacttttatcttgagattcaagaccatggc
ttagaagaacaaaaaatagctttaaggggaatttataaacttagtgaagaattaaatata
cctttagttgcaaccaatgatattcattatataaatcgcaatgattcatcggtacatgat
gtacttttatgtattcaaacaggtaaggttgtagatgatgagcaacgcatgaggttttat
ggtagcgagttttatatgaaatcgttagaagagatgtcagagctttttcctaactatccc
gaagcaatggttaacaccttaaaaataagtgaaaagtgtaatgtaaaatttgattttggt
agcttttttcttccacattttgacatccctaaagagcatactgctgaaagctacctatcg
gaaatagtttggcagagattttatgataggtatccatcaccagacaaagagttaataaat
cgtgttgattatgaacttaatatattaaattctatgggctttgctgcctattttttaatt
gtccaagatttagttaactggtcacgcgaaaacggtgtgcctgttggccctgggaggggt
tcggctgcggggagcctagtatcttatatactagatattactacagttgaccctataaaa
tatgatttaatttttgaacgctttttaaatccggaaagagtaagtatgccggatatagat
atagatttttgctttgaaaaaagagacaaggtaattgactacatagttgaaaaatatggt
gctaatcgcgtggcacaaattattacatttggtactatggctgcgcgagcagctataaga
gatgttggacgtgctttagatataccttatggtgaggtagacaagatagctaaaatgatt
cctgctgaactaggggtaactattaatcgctctttagaaatatcaccagagttaatagaa
gcatatgaaaacgattataacactagaaggataattgatattgcaaaagctatagagggt
atgccacgtcatgcttctattcatgcggcaggggttgttattggtaatcaacccttaagc
acaatattgccattacaaaaaacaacagatggacatgttattacgcaatttagtaaagaa
acagttgaagaaataggattattaaaaatggatatattaggtttaagaactttaactgtt
ttagatagggctttagatataatagaaaaaactcgtggtattagggttaatatagatagt
gtagaaatggatgatcctaaggtttatgaattaatatctgcgggtaaaacggtaggggtg
tttcagttagaaagtgatggactgcgaagaatacttactgaaatgaaaccaaaccgcttt
gaagacttagttgcagttatagcgctttatcgtcccggtcctttaggaagtggcatggta
gaagactttattaatcgtaaacataaaaggcaggaaacagaatacattcaccccatgctt
gaagaagtattagaagaaacctatggagttatattatatcaggaacaagttatgaaaata
gcaaatgacttagctaattttactatgggagaagctgacatactaagaagagctatgggg
aagaaaaaaccacaggaactagttactcaaagagataaatttgtaaaagcggccaaagaa
aataatatccctgagaatacatctaatcgattatttgataatatggagagttttgcaggg
tacggttttaacaaaagtcactctgcggcatatgcagttatatcatatcaaacagcttac
ttaaaagctcactatccagctgaatatatgtgtgcttttttaactagtgtaatagaccat
caagacaaggtagttttttatttgcaagaatgtaagctattaggcatttccatacttcct
cctgatataaatgaaagctttgaaaattttactgtatcaaaggatggaataagatttggt
ttaggagccattaaaaatgtgggttttaatgctgttaagaacatagtggagactagaaaa
aaagagcattttacatcactttatgacttttgccgtagagtagatttatcaataataaat
aaaagaacagttgaaaatttaatattagcaggttgttttgattcattaggaattagtaga
aaacaaaacctatcaattatggaagagtgtataaatttagcaatagctatacaacaaact
gaaaatagtaatcagttaacactatttggcgaagaggcttcacaaattgatgaacctaaa
cctacagttagtggggaaatggatatttatgataaactttcgcgagaaaaagatgtttta
ggtttttatgtatcggagaatcctttagataggtataaaaatatattagacctagttact
acatgtagtattaatgaattaaataatagtaatgaagaagcttatgtaagagtagctggc
ttagcagtaaatttagtaaaaagaatcagtaaaaaaggtgaaaactatgcaagatttata
ctagaggacttaactggccgaatggatatgtttttatttccatcggcatacaaggaatat
attaatagtattcaaccagacactatactaattatagaaggtttttttgataatcgagaa
gatcagcctaaaattgcagtgagaaaagcttatcctatagttgataaggtgaaagagctg
aatatacgtatatccccggacctatctgatgctaaccataaggaaaaactaatcaacata
cttaaaaagcatcctggtaatgcaggggtattagtacatctttctagtaaaaggcgcatt
gttttagatgagaagtataatgttgcttcaagtatagagttaaagaaagaattaatcgat
atatatggaaagaataatatatggtttctatag
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