Candidatus Syntrophocurvum alkaliphilum: SYNTR_2020
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Entry
SYNTR_2020 CDS
T06326
Name
(GenBank) tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salq03016
]
SYNTR_2020
Transfer RNA biogenesis [BR:
salq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SYNTR_2020
Prokaryotic type
Methyltransferases
SYNTR_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
GTP_EFTU
MMR_HSR1_Xtn
AAA_29
Creatininase
Motif
Other DBs
NCBI-ProteinID:
QGU00614
UniProt:
A0A6I6DI92
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All DBs
Position
2078431..2079816
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AA seq
461 aa
AA seq
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MIEDRIVAISTPPGEGGIAIIRLSGDGVIESIDNMFLPYKKGVSLKNKNGYTLTYGWILD
ENGEKIDEVLVSIMRSPKSYTAEDMVEINCHGGNMPARRCIERILKSEKNIRLSEPGEFT
KRAFLNGRLDISQAEGIIEIIRSKTSKSLNLAVKQLEGKTSQYINKIEDELIRLNAMVEA
SIDFPDEVGGLDYNEVNQILESVDFTLNKLINASERSQIYRDGISVAISGKPNVGKSSLL
NALIRKERAIVTSIPGTTRDVLEEYINVRGIPVKLVDTAGIRETHDVVEEIGVKKSKEVI
DESDLVLFILDFETGITDEDLEIYNLIKDKNTIILVNKEDLEKRNITENEIAKLFKDLKI
IRGSVKEDIGLDELESTIEEMILGDSLNSDDLELMINLRQKNSLIKAQEYISNIKYTVNE
VSLDCLGVDVWGALDSLGEITGKSLKEDVIDRIFRDFCIGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagatagaatagttgctatttcaacaccacctggtgaaggaggcattgccatt
ataaggttaagtggtgatggtgttatagaaagtatagataatatgtttttaccttataaa
aaaggggtcagtttaaagaataaaaatggttatactttaacttatggatggatattagat
gaaaacggcgaaaaaattgacgaagttttagtaagtattatgagatcaccaaaaagttat
acagcagaggatatggtagagattaattgtcatggtggtaatatgcctgcaagaagatgt
attgaaaggatattaaaatctgaaaaaaatattcgtctatcagagccaggagaatttact
aaaagagcatttctaaatggtcgtttggatataagtcaagcagaaggtattattgagatt
ataaggtctaaaacttcgaaaagtttaaacttggctgttaaacaattagaaggtaagact
agtcagtatataaataaaatagaagatgaattaattagattaaatgctatggttgaagca
agtatagattttcctgatgaagtaggtgggttagactataatgaggttaatcagatatta
gaaagtgtagattttactctaaataaacttattaatgctagtgagagaagtcaaatatat
cgtgatggtattagtgttgctattagtggaaaaccaaatgtaggaaaatctagtttacta
aatgcgcttattagaaaagaaagagctatagtaacaagtatacctggtactacaagagat
gttttagaggaatatattaatgttagaggtataccggtaaaacttgttgatactgcagga
attagggaaactcacgatgtagttgaagaaataggagtaaagaaatcaaaagaggttatt
gatgaatcagatttagtgttatttatacttgattttgaaactggtataacagatgaggat
ttagaaatttataatttaataaaggacaaaaatacaattattttagttaataaagaagac
ttagaaaagagaaatattactgaaaatgaaatagcaaaattatttaaagatttaaaaata
atcagaggctctgtaaaagaagacattggtttggatgaacttgaatcaacaatagaagaa
atgatacttggcgatagtttaaatagtgatgatttggaattaatgataaatttgaggcaa
aaaaattcacttattaaagcacaagaatatatttctaatataaaatatactgtaaatgaa
gtttctcttgattgtttaggagtggatgtatggggagctttagattcactaggtgaaata
actggtaagtctttaaaggaagatgtaatagatcgaatttttagagacttttgtattggt
aagtag
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