Salarchaeum sp. JOR-1: FQU85_00380
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Entry
FQU85_00380 CDS
T06128
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
salr
Salarchaeum sp. JOR-1
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salr03000
]
FQU85_00380
Transcription factors [BR:
salr03000
]
Prokaryotic type
Helix-turn-helix
Other families
FQU85_00380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
PAS_4
GAF
PAS_9
PAS
GAF_3
Response_reg
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QDX39410
UniProt:
A0A518S7Q0
LinkDB
All DBs
Position
pJOR178:68105..70975
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AA seq
956 aa
AA seq
DB search
MASTATVLGSARLLLVGTAPWVETFEARLTARTDAHVDRVQTADGALDAVGDDVDCVVTG
DALADTDGLDLVRALRSETGSLPIVLCTANGSERLASDAIAAGVTDYVALSGDDTLPENL
HERVERHIRGARRTTTQRDRARQFDAIFHDSRTATWVLEPTGELARVNETARDLIDAAVE
SLVGQPFWELPWWSERAGTQSDIRQVVENTMQGEFGNVVVTRDVPDDTARVLDIAARPVH
DERGTLVAIVIEGVDITDRVELERDLRQSEELHRVTLNNMTDTVLITDEDGEYTYVCPNV
HYIFGYTADEIREQGGITDLLGDDLFDREELAERGVLKNIECTATDKAGREHTLLVNVRE
VSIQDGTLLYSCRDITKRKQREDALTTLQETTRDFLYASTHREIAQHVVEDTPSVLDVEA
SGVYLFDADANELEPAAQSAAMDRLNGPLATVPANSDSPVSHSFVQNDALFLDDVHESNR
LEEPATDLRSVAFIPLGEHGLFVAGTQTVGAFDDMTGELADLLAATAEAALDRVSRESRL
RDQDRELQRQNQRLTHLNQVNETIREIDQALVKAETRDEVDHTVCELLTDDDRFSFAWIG
TTDPAGDAVEPRAWAGAEQGYLDGQSFELDGTGVDPAARTAASGDVVRISNVASRLHEEA
WRKEALSRDFLSVLSIPLQYNDLTYGVLTVYAERQRAFDETSRGVLAELGETIASALSGI
ERKNALLTTAVTRVTLDVADSSFVLSRLASAAECTVSYEGGVQRTAEGTYVFVTVEDAAV
ETVEAIAADLVAVGAVQRVSADGTRGVLRLRLTQPFLALELADHGAVFRSATATPTGTRL
TIDVPESVDVRHVTGLVGEAFADVTLRSKQSVDERSEYDLYSQFIAELTDRQLEVVQTAY
YSGFFESPRENTGEEVAAMLDISPPAFYEHVRTVQRKLFAALFDETRVPTHPGEVE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaccgccacggtcctcggttccgcgcggctcctcctcgtcgggacggcgccg
tgggtcgagacgttcgaggcgcgtctcacggcgcggacggacgctcacgtcgacagggtt
cagacggccgacggcgcgctcgacgcggtcggtgacgacgtggactgtgtcgtcaccggc
gacgcgctcgcggacacggacggtctcgacctcgtccgcgcactccgctccgagaccgga
tcgctcccgatcgtcctgtgtaccgcgaacggatctgaacgcctcgccagcgacgctatc
gccgcgggcgtcacggattacgtcgcgttgagcggcgacgacacgctcccggagaacctg
cacgagcgcgtcgagcgacacatccggggcgcgcggcggacgacaacgcagcgcgaccgc
gcccgacagttcgacgcgatcttccacgattcgcggacggccacgtgggtgctggagccg
accggggaactcgcgcgtgtcaacgagaccgcccgcgacctcatcgacgcggctgtcgag
tcgctcgtcggccagccgttctgggagcttccctggtggtccgaacgggcaggcacgcag
tcagacattcgacaggtcgtcgagaacacgatgcagggcgagttcgggaacgtcgtcgtg
acaagagacgtcccggacgacaccgcgcgcgtgctggatatcgccgcccgacccgttcac
gacgagcgggggacgctcgtcgccatcgtcatcgagggcgtcgatatcacggatcgtgtc
gaactcgaacgggatctccggcagtccgaagaactccaccgggtcaccctcaacaacatg
accgataccgtcctcatcacggacgaggacggcgagtacacgtacgtctgcccgaacgtc
cactacatcttcgggtacactgccgacgaaatccgcgagcagggcgggatcacagacctc
ctcggggacgacctcttcgaccgcgaggaactcgcggaacgcggcgtgctgaagaacatc
gagtgcacggcgacggacaaggccggccgcgagcacacgctcctcgtcaacgtccgcgag
gtgtcgattcaggacggcacacttctctacagctgtcgggatatcacgaagcgcaagcag
cgcgaggacgcgctgacgacgctgcaggagacgacgcgggacttcctgtatgcgagtacg
caccgcgaaatcgcccagcacgtcgtcgaggacaccccgagcgtgctcgacgtggaagcg
agcggagtctacctgttcgacgccgacgcgaacgaactcgaaccggcggcccaatccgcc
gcgatggaccggctgaacggcccgctcgcgaccgtaccggcgaacagcgactccccggtg
agtcacagtttcgtgcagaacgacgccctgttcctcgacgacgtccacgagtcgaaccgc
ctcgaggaaccggcgacggatctgcgcagcgtggcgttcatcccgctcggcgaacacggc
ctgttcgtcgcgggtacgcagaccgtcggcgcgttcgacgacatgacgggagagctcgcc
gacttgctcgccgcgactgcggaagcggcgctcgaccgcgtgagccgggagtcacgcctc
cgcgatcaagaccgcgaactccagcgtcagaaccagcggctcacgcacctgaatcaggtc
aacgagacgattcgggagatcgaccaggcgctcgtcaaagccgaaacgcgcgacgaggtc
gaccacacggtctgcgaactcctcacggacgacgaccggttcagcttcgcgtggatcggg
acgacggatccagcgggggatgcggtcgaaccgcgagcgtgggcgggagccgaacagggc
tatttagacggtcagtcgttcgaactcgacggaacgggcgtcgacccggcggcgcggacg
gccgcgtccggggacgtggttcggatcagtaacgtcgcatcgcgactgcacgaggaagcg
tggcgaaaggaggccctctcccgggacttcctgtccgtgttgagcattccgctccagtac
aacgacctcacgtacggcgtgttgaccgtgtacgcggagcgacagcgcgcgttcgacgag
acctcgcggggggtgctcgcggaactcggagagaccatcgcgtccgcgctcagcggcatc
gagcgaaagaacgccctgctcacgacggcggtgacgcgggtgacgctcgacgtggcggac
tcgtcgttcgtcctctcgcggttggcgtcggcggcggagtgcacggtgtcgtacgagggc
ggcgtgcagcggactgccgaggggacgtacgtcttcgtgaccgtcgaagacgcggcggtc
gaaaccgtggaagcgatcgcggcggatctggtcgcggtcggggcggtacagcgcgtcagt
gcggacgggacgcgtggcgtgttgcgcttgcggttgacacagccgtttctcgcgctggag
ctggccgaccacggggcggtgttccgctcggcgacggcgacgccgacggggacgcggctc
acgatagacgtaccggagagcgtggacgtccgtcacgtcacggggctcgtcggggaggcg
ttcgcggacgtgactctgcggtcgaagcaatcggtggacgagcggtcggagtacgatctg
tactcgcagttcatcgcggagttgactgaccggcagctagaggtcgtgcagacggcgtac
tacagcgggttcttcgagtcgccgcgcgagaacaccggggaggaggtggcggcgatgctg
gacatctccccgccggcgttctacgaacacgtgcgaacggtgcagcggaagttgttcgcg
gcgctgttcgacgagactcgcgtcccgacccaccccggagaggttgaataa
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