Salarchaeum sp. JOR-1: FQU85_00930
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Entry
FQU85_00930 CDS
T06128
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
salr
Salarchaeum sp. JOR-1
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salr03000
]
FQU85_00930
Transcription factors [BR:
salr03000
]
Prokaryotic type
Helix-turn-helix
Other families
FQU85_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS_4
PAS
PAS_3
GAF_2
PAS_8
BAT
HTH_10
GAF
GAF_3
PAS_7
SpoVT_C
Sigma70_r4
Phage_RBD_prop
Motif
Other DBs
NCBI-ProteinID:
QDX39520
UniProt:
A0A518S7Z9
LinkDB
All DBs
Position
14565..18608
Genome browser
AA seq
1347 aa
AA seq
DB search
MIQKSDDFRVLTVTNDTEVGRQLATTLADTDDRLIVDAYSEEVYTNGSLTEEFISQFLIA
DCIVSTDHVLKQCPIDFVEAVRAESPALPFVLLTESTSASEPAVPGDCLAAAIGQEITDW
FPIEFVYERPESVATRIIDTIGGLSSHVQPREPAAQRTLEVCPDAVTVAVDGDFVYVNEA
AVELLGASTRGELLDRPVSDVLHPENQEEILENMESITGRERVVSDRPRKLLTLDGRVIH
VEVTARNVEWEDQQAVVAILHDVTERVRQQRELERQNEQFEQIAARLEQTVIWMATPDLQ
QTVYVSPGYESIWGRSTDSLYEDFESFLNGVHPDDQERIEEQLAQLRADAAHGDAQPEYK
QEFRVCHPDGTVRWVENTTFPLRNGDEVIQWIGITTDITTRKEREQDLRQYQTVIKALDN
PVWATDEEGNVTFVNQQFCESAGQPREALLGRPIHAVFRTEKNVAEEAATSLRDAVEAIL
RSEKDNAHRELEITHSDSSMVRNVQVVPLVEEGDITGAIGIDYDITEQKRQEEKRKQTID
RVTDAIVRVDDEWQFTFVDEQAEDYYEMTEEELLGRDFWEVFEGVRNTRFEDAYRHVMGT
REPMSVEEYSSDLDDWFHVEVYPDDRGGLSFYFREITERKEREEELQMKTRAMEEAPIGI
LITDPSQDDNPIIYANTGFERLTGYTKEEILGRNCRFLQGEETDPEPVAAMRKAIDNQES
VSVELRNYRKDGTRFWNHMTIAPITNDAGDVTHYVGFQEDVTERKEYEQTLPALHEATND
FIQASSQTEAAEQIADTVEMATGLSAVAVYHYDDKDGVLRPAASSTTLQELVGNLPVFGP
GEGIAWRAFTTGESVAYDDIRTVDDVYNPETPIRSELIVPVGDHGVILAGSPELGAVTEY
DRKLVELLALSAEAAINTIEQQTQLRARQQELDQRNQQLMRINKLNDIIRNINQILIKSD
TPDTITQGVCDQLVEIDQIEFAWIAKPELDSQAVQPTAWSGSDRSYLDQLGESIGDEVAP
DEPTVQAARTQESVSVPNIARQPSSDWQTSALQQGYSSVLSVPLIYEESFYGALSVYASD
QQFFEEEYQDVMTELGKMTGLGINTINQRDALLGKQYTTITLQIDGVASSKQPFLNLSNQ
LGCEVELSTILSSKRGHIVYAQIQDVTATDVIEFAEKTSEINHARQVQGTNHCETEPCLF
EFLVRETCLAIQIADQGGVPKTITFNNNRGRVIADLPPTVEPATLIESLQSQQSSIQLVS
TSTQQNPIESSDIFNQDSSESPNIYILQNDLTSAQREAVEAAYAGGFFEWPRDSTGEEIA
DVLGISQPAFSERLRAAQRKIIAAYCR
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgatacagaaaagtgatgattttcgtgtattgactgtcaccaacgatacagaggtcggt
agacaactggcaacaaccttggcggatacagatgatcggctcatcgttgacgcgtattca
gaggaagtttataccaacggtagccttactgaggagttcatttcacagtttctgattgcc
gattgtatcgtgagtaccgatcacgttctcaagcaatgtcccatagacttcgtggaggcg
gtccgtgcggaatcgcccgccctcccattcgttcttttgaccgagagtaccagcgcttct
gaaccagccgttcctggcgattgtcttgccgctgcaatcggtcaagagatcaccgactgg
ttccccatagaatttgtctacgaacgtccggagagcgttgctacgcgtattattgatact
attggcgggctgtcgtcgcacgttcagccgcgtgagccagcagcccagagaaccttggaa
gtatgtcctgacgctgtgactgtggctgtagatggagacttcgtgtatgtgaatgaagca
gccgttgagttattgggtgcatcaactcgtggtgaacttttggatcgaccagtaagtgac
gttttgcacccggagaatcaagaagaaattctggagaatatggagtcaatcacagggcgt
gaacgggtcgtttcagatcgtcctcgaaaactcttaacgcttgatggcagggtcattcac
gtcgaagtaacggcacgcaacgtcgaatgggaagaccagcaggctgtcgttgccattctg
catgatgtgactgagcgtgtcaggcaacagcgagagctggagcgacagaacgaacaattc
gaacagatcgctgcccggcttgagcaaacggtcatctggatggcgacccccgatctccag
cagacggtgtacgtgagtccgggatacgaatcgatctgggggcgctctactgattcccta
tacgaggattttgagtccttccttaacggcgtacaccccgatgatcaggaacggatagaa
gaacagctagcacagctgcgggcggatgctgcacatggtgacgcccaaccggagtataag
caggaattcagggtatgccatcctgatgggactgtccgatgggttgaaaacaccacattc
ccgctacgcaacggcgatgaggtaatacagtggattgggatcactactgatatcacgaca
cggaaagagcgcgagcaagatctccgacagtaccaaacagtcattaaggcgcttgacaat
cccgtgtgggcgaccgatgaagagggaaacgtgacgttcgtgaaccagcagttttgtgag
tcagcggggcagccgcgtgaagcgcttcttggacgaccaatccacgcagtattccgtacc
gagaagaatgtggctgaggaagcggcgacatcactcagggatgctgttgaggcgattctt
cgcagcgagaaagacaacgctcaccgtgagctagaaatcactcactctgactcctccatg
gttcgaaacgtacaggtcgttccgctggttgaagaaggcgacatcacaggtgcgatcggg
attgattacgatattactgagcagaagcgacaggaggagaaacgcaagcaaacgattgat
cgggtcacggatgccatcgtcagagttgatgacgagtggcagttcacttttgttgacgag
caagctgaagattactatgagatgactgaagaggaacttctcggacgggatttttgggag
gtatttgaaggagttcggaatactcggtttgaagacgcgtatcgacacgtcatgggaacg
cgggagccgatgtcggttgaggaatattcgtccgatttagatgactggttccacgttgaa
gtgtaccccgacgatcgcggcggattatcgttctatttccgtgaaattactgaacgtaaa
gaacgcgaggaagaactccagatgaaaacacgcgcgatggaggaagctccgatcgggatt
ctcatcaccgatccttctcaggatgataacccaattatttacgctaatacagggtttgaa
cgcttaactggttatacgaaagaagaaatcttgggccggaactgtcggtttctccagggc
gaggagacagacccggaaccggtcgcagcgatgcgcaaagcgattgacaatcaagaatcg
gtgtcagttgaactccgcaattaccggaaagatggcactcggttctggaatcacatgaca
atcgcccccataacgaacgatgcaggcgatgtgacgcactatgtcgggtttcaggaggac
gtgacagagcgcaaggagtacgaacagaccctaccagccctacatgaagcgacgaacgac
ttcatccaagcatcatcgcaaactgaggctgccgagcagatagccgatactgtagaaatg
gccaccgggttatcggccgttgccgtctaccactacgacgacaaggacggagttcttcgg
ccggctgccagttctactactcttcaggaactcgtcggcaatctacccgtctttggtccg
ggtgaggggatcgcgtggcgtgccttcacaactggggagtcggttgcgtacgatgatatt
cggactgttgatgacgtgtataatcccgaaacgccgatccgaagtgagcttattgtgccg
gtcggtgaccacggcgtcattttagctgggagtccggagctgggagcagttaccgaatat
gaccgcaaactcgtagaactactggccctctccgcggaagctgcgatcaatacgattgag
caacaaacccagttacgggctcgacaacaggagctggatcagcggaatcaacaacttatg
cgtattaataaactaaatgatataattcgaaatattaatcagattctcatcaaatcagac
acgcccgataccatcacccagggcgtttgtgatcaactggttgaaattgatcaaatagaa
tttgcatggattgccaaaccagaactagatagtcaagcggtacagccgacagcgtggagt
ggatccgaccgttcgtacctagatcagcttggtgagtcaatcggcgacgaagtagcccca
gatgaaccgactgtccaagcggcccggacccaggagtccgtttctgttcccaacatcgca
cggcaaccctctagtgactggcaaacgtcggcgcttcaacagggctatagctccgttttg
agtgttccgctcatctatgaggagtccttctatggggcgttgagtgtgtacgcgtctgat
cagcaattctttgaggaggaataccaagacgtgatgactgaattgggtaaaatgacagga
ttaggcataaatacgataaaccaacgtgacgcactgctggggaaacaatacacgactatc
acgctccagatagacggtgttgcatcttccaagcagcccttcctcaacttatccaatcaa
ctcggatgtgaggtagaactcagcacgatcctctcaagtaagcgaggccacattgtgtac
gcacaaatccaggatgtcacggctacagatgtgatcgaattcgctgagaaaacttcggag
atcaaccacgcacgtcaggttcaagggacgaatcactgcgagacagagccttgcctgttt
gaatttctcgtgagagaaacgtgtttggcgattcagattgctgaccaaggaggggtgcca
aagacaataacctttaacaataaccgcggacgggttattgcagatctgcccccaacagta
gaaccagcaaccctcatagaatcgctgcaatctcagcaatcctctatccaacttgtctca
acaagcactcaacaaaatccaattgagtcatctgatatcttcaatcaggactcaagtgaa
tcacctaatatctacatattgcagaatgatctcacctccgctcaacgagaagcggttgaa
gccgcatatgcgggtggatttttcgagtggccgcgtgacagcaccggggaagaaatcgcg
gatgtcttaggaatctcccagccagccttctcggaacggttacgagcagctcagcgaaaa
atcatcgccgcgtactgtcgttaa
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