Salarchaeum sp. JOR-1: FQU85_02725
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Entry
FQU85_02725 CDS
T06128
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQU85_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salr03400
]
FQU85_02725
Enzymes [BR:
salr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FQU85_02725
DNA repair and recombination proteins [BR:
salr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FQU85_02725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QDX39863
LinkDB
All DBs
Position
complement(339732..340565)
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AA seq
277 aa
AA seq
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MLRVGAHVSIAGGIDNAVERETGVGGNCGQIFTHSPQVWQDPNIGDDEAAAFRDETTEEL
DGPWVIHSSYLVNLCTPKDGLREKSIDSMQKEVDAADELGIEYVNVHLGAHTGAGVENGL
ENAASALDELDIPEGVTVLVESDAGSGTKLGGDFAHLAGVLDRSSQDLDVCLDTAHAFAA
GYDLSTPEGVDDTLQAFDDEIGLEHLACVHLNDSKHECGTNKDEHAHIGEGYIGEDGMTA
FVNHDAIREVPLVLETPNEDDRGFAWNIEKVRELRDA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagtaggcgcacacgtctctatcgccggcgggatcgacaacgccgtcgaacgc
gaaaccggcgtcggcgggaactgcggccagatattcacgcactccccgcaggtctggcaa
gaccccaacatcggcgacgacgaagcggccgcgttccgcgatgaaaccaccgaggaactc
gacggcccctgggtgattcactcctcctacctcgtgaacctctgcacgccgaaagacggc
ctccgagagaagtccatcgactccatgcagaaggaagtcgacgccgcggacgaactcggc
atcgagtacgtgaacgtccacctcggggcgcacaccggcgcgggcgtcgagaacggactc
gaaaacgccgcgagcgcgctcgatgaactcgatattcccgaaggcgtcaccgtgctcgtc
gaatcggatgccgggtcgggaaccaagctcggcggcgacttcgcccatctcgcgggcgtc
ctcgaccgctccagccaagacctcgacgtgtgtctcgacaccgcgcacgcgttcgccgct
ggctacgacctctccacgcccgagggcgtcgacgacacgcttcaggcgttcgacgacgaa
atcgggctcgaacacctcgcgtgcgtccacctcaacgactcgaaacacgagtgcggcacg
aacaaggacgaacacgcccacatcggcgaggggtacatcggcgaggacggcatgacagcg
ttcgtcaaccacgacgccatccgcgaggtacccctcgtcctcgaaaccccgaacgaggac
gaccgcgggttcgcgtggaacatcgagaaagtgcgggaattacgggacgcgtaa
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