Salarchaeum sp. JOR-1: FQU85_03235
Help
Entry
FQU85_03235 CDS
T06128
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FQU85_03235 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salr03021
]
FQU85_03235 (rpoB)
Enzymes [BR:
salr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FQU85_03235 (rpoB)
Transcription machinery [BR:
salr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FQU85_03235 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Zn_ribbon_NOB1
Zn_Ribbon_TF
HypA
zf_DPOE_2
McsA
Ribosomal_aS21
FtrD-like
Cas12f1-like_TNB
DUF5816
Motif
Other DBs
NCBI-ProteinID:
QDX39957
LinkDB
All DBs
Position
complement(433031..434857)
Genome browser
AA seq
608 aa
AA seq
DB search
MSQSQEAKVYVNGSLVGTHDDPHELAESIREARRRGDISDMVNVSVKERTGEVIVNADAG
RARRPLLVVEDGEPLVTESDIDALENGEVEFETLVDEGKVEFIDAEEEEDILVAVEEDDL
TDDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQH
LMHYPQKAMVNTQTTKQIGYDDRPAGQNFTVAVMSYEGFNIEDALVMNKGSVERALARSH
FFRTYEGEERRYPGGQEDRFEIPDDDVRGARGEDAYKHLDEDGLVNPETRVDENSVLLGK
TSPPRFLEEPDEMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLAKVSVRDERI
PELGDKFASRHGQKGVVGHLAPQEDMPFTQEGVVPDLVLNPHALPSRMTVGHVLEMLGGK
SGALEGRTVDGTAFTGEDEEELRSSLQERGFKSSGKEVLYSGVSGEKIEAEIFVGNIFYH
KLYHMVSNKMHARSKGPVQVLTRQPTEGRAREGGLRLGEMERDTVIAHGAAMVLKERLLE
SSDQEYVDICGNCGMTAVENREQRRVYCPNCGEETDVHSIEMSYAFKLLLDEMKALGIAP
RLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcacaggaagccaaagtctacgtgaacggcagcctcgtcgggacgcacgac
gacccgcacgagctcgccgagagcatccgggaagcgcgacgccggggcgacatcagcgac
atggtgaacgtctcggtgaaagaacgcacgggcgaagtcatcgtgaacgcggacgcgggc
cgcgcgcgccgcccgctcctcgtcgtcgaggacggtgagccgctcgttaccgagtccgac
atcgacgccctcgagaacggcgaggtcgagttcgagacgctcgtcgacgaggggaaggtc
gagttcatcgacgccgaggaggaagaggacattctcgtcgccgtcgaggaggacgacctc
accgacgaccacacgcacctcgaaatcgacccgcagctcatcttcggtatcggcgcgggg
atgattccgtaccccgagcacaacgccagcccgcggattacgatgggtgcggggatgatg
aagcagagtctgggcctgccggcggcgaactatcggatccgcccggacacccgccagcac
ctgatgcactacccgcagaaggcgatggtgaacacccagacgacgaagcagatcgggtac
gacgaccggcccgccggccagaacttcacggtcgccgtcatgagctacgaggggttcaac
atcgaggacgcgctcgtcatgaacaagggctccgtggagcgcgcgctcgcccgctcgcac
ttcttccgcacgtacgagggcgaggagcggcgctaccccggcggccaggaggaccgcttc
gagatcccggacgacgacgttcgcggcgcgcgcggcgaggacgcgtacaagcacctcgac
gaggacggcctcgtcaaccccgagacgcgcgtggacgagaacagcgtcctgctcgggaag
accagtccgccgcgattcctcgaggaaccggacgagatgggtggactgagcccgcagaag
cgccgcgagacctcggtgacgatgcgctcgggcgaggacggcgtcgtcgacacggtgacg
ttgatggagggcgaggacggctcgaagctcgcgaaggtgagcgttcgggacgaacgcatc
cccgaactcggggacaagttcgcgagccggcacggacagaagggcgtcgtcggccacctc
gcgcctcaggaggacatgccgttcacgcaggagggcgtcgtgcccgacctcgtgttgaac
ccgcacgcgctcccgtcccggatgacggtcggccacgtgctggagatgctcggcgggaag
tccggcgcgctcgaaggccggacggtcgacggcaccgcgttcacgggcgaggacgaggag
gaactccgatcctcgctccaggagcgcggattcaagtcgagcgggaaggaagtgctctac
tcgggcgtctccggcgagaagatcgaggccgagatcttcgtcgggaacatcttctaccac
aagctctaccacatggtgtcgaacaagatgcacgcccggtcgaaggggccggtgcaggtc
ttgacccggcagccgaccgagggacgcgcccgcgagggcggtctccgactcggggagatg
gagcgcgacaccgtcatcgcccacggcgcggcgatggtgctcaaggaacgcctcctcgaa
tcctccgaccaggagtacgtggacatctgtgggaactgcgggatgaccgcggtggagaac
agagaacagcgccgcgtctactgtccgaactgcggcgaggagacggacgtgcacagcatc
gagatgagttacgcgttcaaactcctcctcgacgagatgaaggcgctcggcatcgcgccg
cgactcgaactggaggacgcagtctaa
DBGET
integrated database retrieval system
