Salarchaeum sp. JOR-1: FQU85_03955
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Entry
FQU85_03955 CDS
T06128
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
salr
Salarchaeum sp. JOR-1
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salr03016
]
FQU85_03955 (endA)
Enzymes [BR:
salr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
FQU85_03955 (endA)
Transfer RNA biogenesis [BR:
salr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
FQU85_03955 (endA)
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Ortholog
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
QDX40084
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All DBs
Position
complement(562431..563462)
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AA seq
343 aa
AA seq
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MNGHARDGLVHVGGDARQRFYDSRGYGRPRDGDDVVLAPVEAAHLLFRGDLDAVEVDGND
CGFADYLARQNAGFGARFVVYADLRDRGFYLSPARDGWVDDSEGIDFVVYPRGDGPWDDT
EAYRIRTVSERADVAASALGDVTLAVVDEESDITYFETERLAVPDDTPETPPAADGVLLD
DRVVVWEPPERLHHEFFYGQPLTGRAAEHAPLQLSLVEAAHLAAVGALSVEGGVEAVVER
GRDAEGGRFDRRLRAYRALRDAGYTPKTGFKFGADFRVYHDIEDADNLGHSPWLVRSLPA
DHTFSPRDVALDVRLAHGVRKRMVFALDAQDSPDWLAVSRLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacacgcgcgcgacggactcgtccacgtcggcggggacgcccgtcagcgcttc
tacgactcccgtgggtacgggcggccgcgggacggcgacgacgtggtgctcgcgcccgtc
gaggccgcccacctcctgttccgcggcgacctcgacgccgtcgaagtcgacgggaacgac
tgcgggttcgcggactacctcgcccgacagaacgcggggttcggcgcgcggttcgtcgtg
tacgccgacctccgcgaccgcgggttctacctctcgcccgcccgcgacggctgggtcgac
gattcggaggggatcgacttcgtggtctacccgcgcggggacggcccgtgggacgacacg
gaggcgtaccggattcgcaccgtgagcgaacgcgccgacgtggccgcgagcgcgctcggg
gacgtgacgctcgccgtcgtggacgaggagagcgacatcacgtacttcgagaccgaacgc
ctcgcggtccccgacgacacgccggagacgccgcccgcggccgacggcgtgctcctcgac
gaccgcgtcgtggtctgggagccgcccgaacgcctccaccacgagttcttctacggccag
ccgctcacgggacgcgccgccgagcacgcgccgctccagctgtcgctcgtggaggccgcg
cacctcgccgcggtcggcgcgctgtccgtcgagggcggcgtcgaagccgtcgtcgagcgc
ggccgggacgccgagggcggccggttcgaccgccggctccgcgcgtaccgcgcgctccgc
gacgccggctacacgcccaagaccgggttcaagttcggcgcggacttccgcgtctaccac
gacatcgaggacgccgacaacctcggacactccccctggctcgtgcgctcgctccccgcc
gaccacacgttctccccgcgggacgtggcgctcgacgtccggctcgcgcacggcgtgcgg
aagcgaatggtttttgcgctggacgcacaggattcacccgactggctcgcggtctcccga
ctcactccatga
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