Salarchaeum sp. JOR-1: FQU85_05015
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Entry
FQU85_05015 CDS
T06128
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03410
Base excision repair
salr03430
Mismatch repair
salr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQU85_05015
03430 Mismatch repair
FQU85_05015
03440 Homologous recombination
FQU85_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salr03400
]
FQU85_05015
DNA repair and recombination proteins [BR:
salr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FQU85_05015
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FQU85_05015
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FQU85_05015
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
QDX40287
UniProt:
A0A518SA96
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All DBs
Position
complement(770357..771766)
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AA seq
469 aa
AA seq
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MSETTASFPVPELEARARRCADALRDADAVLLASHIDADGLTSAGVASQALSRAGIDHET
RFENQLGPEEIADIADADYDTVLFTDFGSGQLDEIVKYGFTPVVADHHQPADVDIEHHLN
PLLEGVDGGSELSGAGAAYVLARALGGPENRDLAALAVVGAVGDMQTEGGELVGANTAVA
KEGVEAGVLDTTRGLAVYGVQTRSLPKLLAYASEVQIPSITNDRQGAVRFLAGLDIDLRR
DGEWPTWAELTVDQKQTVASALIRRAIRNGVSTDDVENLVGTTYTLVEEEPGTEVRDASE
FSTLLNATARYERADVGLAVCLGDRDSALAEARELLTEHRRNLSAGVRWVEEHGVTQEEH
VQWFDAGDEIRDTIVGIVAGMAMSADGVRYDKPIVALARKNETELKASARGTSRLVDEGL
DLSAVMGEAARSVGGDGGGHTVAAGATIPDGDVEAFVDEVGRLVAAQLS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacgacggcgtcgttccccgtaccggaactcgaagcgcgcgcacgccggtgt
gcggacgcgctccgcgacgcggacgcggtgctgctcgcgtcccatatcgacgccgacggc
ctcacgagcgccggcgtcgcctcacaggcgctctcacgggcgggaatcgaccacgagacc
cgcttcgagaaccagctcggccccgaggagattgcggacatcgccgacgcggattacgat
accgttctcttcacggacttcgggagcggccagctcgacgaaatagtcaagtacggcttc
acgcccgtcgttgcggatcaccaccagcccgccgatgtcgacatcgaacaccacctgaac
ccgctcctggagggcgtggacggcgggagcgagctctccggcgcgggcgcggcgtacgtg
ctcgcgcgagcgctcggcggccccgagaacagggacttagcggcgctcgccgtcgtcggc
gcggtcggcgacatgcagaccgagggcggggagttggtcggcgcgaacaccgccgtcgcg
aaggagggcgtagaggcgggcgtgctcgacaccacgcgcggactcgccgtgtacggcgtg
cagacgcgctcgctcccgaaacttctggcgtacgcgagcgaggtgcagatacccagcatc
acgaacgaccgacagggtgcggtgcgcttcctcgccggcctcgatatcgaccttcggcgg
gacggcgagtggccgacgtgggcggaactcaccgtcgaccagaagcaaacggtggcgagc
gcgctcatccggcgcgcgatacgcaacggcgtcagcacggacgacgtcgagaacctcgtc
ggaacgacgtacacgctggtcgaggaggaaccgggaaccgaggtgcgggacgcgagcgag
ttctcgacgctcctgaacgcgacggcgcgctacgagcgcgctgacgtggggctcgcggtc
tgtctcggcgaccgggatagcgcgctcgcggaggcccgagagctcctcaccgaacaccgc
cggaacctctccgcgggcgtacggtgggtagaggagcacggtgtcacccaggaggagcac
gtgcagtggttcgacgcgggcgacgagattcgggacaccatcgtcggtatcgtcgcggga
atggcgatgagcgcggacggcgtgcggtacgacaaacccatcgtggcgctcgcgcggaag
aacgagacggagttgaaagcttcagcccgcggaacgagccggctcgtcgacgaggggctc
gacctctccgccgtgatgggggaggcggcgcggtcggtcggcggcgacggcggcgggcac
accgtcgcggcgggcgcgaccattccggacggcgacgtcgaggcgttcgtcgacgaggtg
ggccggctagtcgctgcgcagctatcctaa
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