Salarchaeum sp. JOR-1: FQU85_05890
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Entry
FQU85_05890 CDS
T06128
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FQU85_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salr03021
]
FQU85_05890
03019 Messenger RNA biogenesis [BR:
salr03019
]
FQU85_05890
Transcription machinery [BR:
salr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FQU85_05890
RNA polymerase I system
FQU85_05890
Messenger RNA biogenesis [BR:
salr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
FQU85_05890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DZR
Zn_Ribbon_1
Zn_ribbon_19
Zn_ribbon_3
Zn_ribbon_15
Zn_Ribbon_TF
HypA
Zn_ribbon_NOB1
zf-C3HC4_3
DUF7575
Zn_ribbon_tTFIIB
Zn_ribbon_8
MJ0401
UPF0547
Motif
Other DBs
NCBI-ProteinID:
QDX40455
LinkDB
All DBs
Position
933529..933726
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACHDCHRIVDPDEETCPYCGSNSLTEDWAGYVVITHPEQSEIAEKMEVAEAGEY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacaggctcgcgtgccacgactgccaccgcatcgtcgacccggacgaggag
acgtgtccgtactgcgggtcgaactcgctcacggaggactgggcgggctacgtcgtcatc
acgcaccccgagcagtccgagatcgcggagaagatggaagtcgcggaagcgggcgagtac
gcgctcaaggttcgatag
DBGET
integrated database retrieval system
