Salarchaeum sp. JOR-1: FQU85_06610
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Entry
FQU85_06610 CDS
T06128
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FQU85_06610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salr03019
]
FQU85_06610
03009 Ribosome biogenesis [BR:
salr03009
]
FQU85_06610
04131 Membrane trafficking [BR:
salr04131
]
FQU85_06610
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salr04147
]
FQU85_06610
Messenger RNA biogenesis [BR:
salr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FQU85_06610
Ribosome biogenesis [BR:
salr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FQU85_06610
Membrane trafficking [BR:
salr04131
]
SNARE
SNARE associated proteins
Others
FQU85_06610
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FQU85_06610
Exosome [BR:
salr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FQU85_06610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
ABC_tran
AAA_18
AAA_17
AAA_3
DUF815
ATPase
Sigma54_activat
Parvo_NS1
NB-ARC
Vps4_C
AAA_24
TsaE
AAA_30
AAA_11
AAA_lid_PRS2_C
PhoH
SLFN-g3_helicase
KAP_NTPase
NACHT
IPT
TrbL_3
Motif
Other DBs
NCBI-ProteinID:
QDX40587
LinkDB
All DBs
Position
complement(1056403..1058625)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVEIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVARDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLVTEDTDVELREEPISGFE
RTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEV
GREEILKIHTRGMPLSDDVNLGNLADDTHGFVGADIESLTKEAAMRALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFRGALNEVEPSAMREVLVELPKISWDDVGGLTDAKQQVQESIEW
PLNSPEKFGRMGVEPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPGRGQNAGNNVSERVVNQLLTELDGLEDMEDV
MVIGATNRPDIIDPALIRSGRFDRMVMVGQPDTEGRERILRIHTDDTPLAPDVSLRELAE
ITDGYVGSDLANIAREAAIEALREDDDATEVGMRHFRKAMENVRPTINDDLLDYYEDVEE
QFKGGQTPETGREGGHIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaggtcgcgaaagcctacccgaacgactcgggcagaggtatc
gcgcgcctcgaccccgacacgctactccacctgaagctcagcccgggcgacatcatcgag
atcgagggcgcggagaccacggccgcgaaggtctggcgcgccgaccggcaggactggaac
acggataccgttcgcatcgacgggttcacccggcagaacgccgacgtcggtatcggcgaa
cgcgtcgagatacgaaaggccgaagcggagaaagcggacaagctcgtgctcgcgccgccc
gaggaagcctcggtgcagttcggcagcgacgccgccggcatggtcaagcgccagattctc
aagcggccggtcgtcgcgcgcgacatcgtccccgtgatgtcctcgacgaaccacccgttc
atgcgctcgcccggccaggcgattccgctcatcgccgtcgagaccgaacccgagggagtc
tgcctcgtcaccgaagacaccgacgtggaactccgcgaggaacccatcagcgggttcgag
cgcaccggcggcggcatcacgtacgaggacatcggcggcctccagaacgagattcagcgc
gtccgggagatggtcgaactcccgatgaagcacccccagatattccagaagctcggcatc
gagccgccgcagggcgtgctcctccacggcccgcccggaacggggaagacgctcctcgcg
aaggccgtcgccaacgagacgagcgcgtcctttttctccatcgccggccccgagatcatc
tcgaagtactacggagagtccgaacagcagttgcgggagatattcgaggacgcgaaggac
gactcgccgtccatcatcttcatcgacgaactcgacagcatcgcgccgaagcgcgaggac
gtgacgggcgaggtcgagcgccgcgtcgtcgcgcagctgttgacgatgatggacggcctc
gaaggccgcggccaggtcatcgtcatcgccgccacgaaccgcgtcgacgccgtcgacccc
gcgctccgccggcccggccggttcgaccgcgaaatcgaaatcggcgtccccgacgaggtc
ggccgcgaggaaatcctgaagattcacacgcgcggcatgccgctgtcggacgacgtgaac
ctcgggaacctcgcggacgacacgcacggcttcgtcggcgcggacatcgagagcctcacc
aaggaggccgcgatgcgcgcgctccggcgctacctccccgagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccgcatgatcgtgaagcgccaggacttccgcggcgcg
ctcaacgaggtcgagccctccgcgatgcgcgaagtcctcgtcgaactcccgaagatatcg
tgggacgacgtgggcggcctcaccgacgcgaaacagcaggtgcaggagtccatcgagtgg
ccgctgaactcccccgagaagttcgggcggatgggcgtcgaaccgccgagcggcgtcctc
ctctacggcccgcccggcaccgggaagacgctgatggcgaaagccgtcgcgaacgagacg
aacgcgaacttcatcagcgtccgcggcccccagcttctctcgaagtgggtgggtgagtcg
gagaaggccatccggcagacgttccggaaggcccggcaggtcagcccgaccatcatcttc
ttcgacgagctcgacagcctcgcgcccggccgcggccagaacgccgggaacaacgtctca
gagcgcgtcgtcaaccaactcctcaccgaactcgacggcttagaggacatggaggacgtg
atggtcatcggcgcgaccaaccgccccgacatcatcgaccccgcgctcatccgctccggg
cgcttcgaccgcatggtgatggtcgggcagcccgacaccgagggccgcgaacgcatcctc
cgcatccacaccgacgacacgccgctcgcgcccgacgtgagcctccgcgaactcgccgag
ataactgatgggtacgtcggttcggatctcgcgaacatcgcgcgcgaagccgccatcgaa
gcgctccgcgaggacgacgacgccaccgaagtcggcatgcggcacttccggaaagccatg
gagaacgtccgccccaccatcaacgacgacctcctcgactactacgaggacgtcgaagaa
cagttcaaaggcggccagacacccgaaacgggacgggaaggcggccacatcggcttccaa
tga
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