Salarchaeum sp. JOR-1: FQU85_10185
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Entry
FQU85_10185 CDS
T06128
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FQU85_10185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salr03021
]
FQU85_10185
Transcription machinery [BR:
salr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FQU85_10185
Prokaryotic type
Archaeal type
TFB
FQU85_10185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
Trm112p
DUF8106
Zn_ribbon_FGT1_1
DZR
Zn_ribbon_LysW
Cyclin_N
Sigma70_r4
DUF7560
DUF8054_C
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QDX41245
LinkDB
All DBs
Position
1785857..1786828
Genome browser
AA seq
323 aa
AA seq
DB search
MSDSRIRRRSDEQRTETETESAEALQCPECGGSLAVDEGRGETVCTDCGLVVEEDEIDRG
PEWRAFDAAEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSNQRQKMQRLRKW
NERFRTRDSKERNLKQALGEIERMSSALGLPKPVRETASVIYRRALDEDLLPGRSIEGVA
TSALYAAARQANTPRSLDEVSNVSRVDKDEIARTYRYVVRELGLEVAPADPASYVPRFVS
DLDLSDEVERQARDLLSNAQDEGITSGKSPVGLAAAAVYAASLLVNERVTQNQVSEVANI
SEVTIRNRYHELLEAASDVPMEA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcacgcatcagacgccggagcgacgagcaacgcaccgagacggaaaccgag
tccgcggaagccctccagtgccccgagtgcggcgggagcctcgcggtcgacgaggggcgc
ggcgagacggtctgcacggactgcggcctcgtcgtcgaggaagacgagatcgatcggggg
ccggagtggcgcgcgttcgacgccgccgagaaggacgagaagagccgcgtgggcgcaccc
accacgaacatgatgcacgacaaagggttgtccacgaacatcggctggcaggacaaggac
gcctacggcaacagcctctcctcgaaccagcgccagaagatgcagcgcctccgcaagtgg
aacgagcgcttccgcacgcgagattcgaaggagcgcaacctgaagcaggcgctcggcgaa
atcgaacgcatgagcagcgcgctcggcctcccgaagccggtgcgggagacggcgtcggtc
atctatcggcgcgcgctcgacgaggacttgcttcccggacggagcatcgagggcgtcgcc
acgtccgcgctgtacgcggcggcgcggcaggcgaacacgccgcggagcctcgacgaggtg
tcgaacgtcagtcgcgtggacaaagacgagatagcgcgcacctaccggtacgtcgtgcgc
gaactcggattggaggtcgcgcccgccgatccggcgagctacgtcccgcggttcgtgagc
gacctcgacctctcggacgaagtggagcgacaggcgcgcgacctcctctcgaacgcacag
gacgagggtatcacgagcgggaagagtccggtcggactggcggccgccgcggtgtacgcc
gcgagcctgctcgtgaacgagcgcgtcacccagaaccaggtgagcgaggtcgcgaacatc
agcgaggtcaccatccgcaaccgctaccacgaactcctcgaagccgcgagcgacgttccg
atggaggcatag
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