Salarchaeum sp. JOR-1: FQU85_12250
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Entry
FQU85_12250 CDS
T06128
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FQU85_12250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salr03019
]
FQU85_12250
03009 Ribosome biogenesis [BR:
salr03009
]
FQU85_12250
04131 Membrane trafficking [BR:
salr04131
]
FQU85_12250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salr04147
]
FQU85_12250
Messenger RNA biogenesis [BR:
salr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FQU85_12250
Ribosome biogenesis [BR:
salr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FQU85_12250
Membrane trafficking [BR:
salr04131
]
SNARE
SNARE associated proteins
Others
FQU85_12250
Autophagy
Aggrephagy
Other aggrephagy associated proteins
FQU85_12250
Exosome [BR:
salr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FQU85_12250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
AAA_33
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_7
IstB_IS21
AAA_lid_PRS2_C
Mg_chelatase
ABC_tran
Sigma54_activat
DUF815
AAA_3
AAA_17
NB-ARC
AAA_24
AAA_18
TsaE
Parvo_NS1
SLFN-g3_helicase
AAA_11
AAA_19
AAA_25
ATPase
AAA_30
PhoH
NACHT
Zeta_toxin
bpMoxR
NTPase_1
Bac_DnaA
Zot
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QDX41638
UniProt:
A0A518SE07
LinkDB
All DBs
Position
complement(2153215..2155485)
Genome browser
AA seq
756 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRQSMQELGLENGDYIVISGTDSGRAVARVWPGYPEDDGQ
GVARIDGRLRQEADVGIDDRVEVEKADIKPAGAITVALPQNLRVRGDISPMVRDRLSGRP
VTAGQTVHISFGFGGLGSSSGQQIPVKIADTEPDGTVVVTDSSEIQLSERPAEEIQTGGD
ESGDATPNVAYEDIGGLDEELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKT
LIAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFDEAEENTPAIIFIDEIDSIAPK
RGETSGDVERRVVAQLLSLMDGLEERGDVTVIAATNRVDAIDPALRRGGRFDREIEIGVP
DKDGRTEILQVHTRGMPLADGIDLDEYAENTHGFVGADIESLAKESAMNALRRVRPQIDL
ESEEIDAELLESIQVTEADMKDALKGIEPSALREVFVEVPDTTWDSVGGLEDTKERLRET
IQWPLDYPEVFESMDLDSAKGVLLYGPPGTGKTLLAKAVANEANSNFISVKGPELLNKYV
GESEKGVREVFEKARSNAPTVVFFDEIDSIAGQRGGNMGDSGVGERVVSQLLTELDGIED
LEDVVVVATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARRAILEVHTREKPLADDVDLD
TVAARTDGFVGADLEALAREATMNATREFVNSVSPEEAVESVGNVRVTMEHFEDALDEVG
ASVDAEVREQYEEIEERFQKAESPDEEEFASGHAFQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacggtcaaacccctaaagcagaaggacgccggccgtggactggccgccatc
gaccgacagtcgatgcaggaactcggcctcgagaacggcgactacatcgtcatcagcggg
acggactcgggtcgcgccgtcgcgcgcgtctggcccggctaccccgaggacgacggccag
ggcgtcgcccgcatcgacggccgcctccgccaggaggccgacgtgggcatcgacgaccgg
gtcgaggtggagaaggcggacatcaagcccgccggcgccatcacggtcgcgctcccgcag
aacctgcgcgtgcgcggcgacatctctccgatggtgcgcgaccgcctgagcggccgcccc
gtcaccgccgggcagaccgtccacatcagcttcgggttcggcggcctcgggtcgtcgagc
ggccagcagatccccgtgaaaatcgcggacacagagccggacggcacggtcgtcgtcacg
gactccagcgagatccagctctccgagcggcccgccgaggagatccagaccggcggcgac
gagagcggcgacgccacgccgaacgtcgcgtacgaggacatcggcggcctggacgaggag
ctcgaacaggtgcgggagatgatcgaactcccgatgcggcaccccgaactgttccagcag
ctcggcatcgaaccgccgaaaggcgtcctcctgcacggcccgccgggcaccgggaagacg
ctcatcgcgaaggcggtcgcgaacgagatcgacgcgcacttcgagactatctcgggcccc
gaaatcatgtcgaagtactacggggagtccgaggagcagctgcgcgaggtgttcgacgag
gcggaggagaacacgcccgccatcatcttcatcgacgaaatcgacagcatcgcgccgaag
cgcggtgagacgagcggggacgtggagcgccgcgtcgtcgcccagctcctcagcctcatg
gacggcctcgaagagcgcggcgacgtgacggtcatcgcggccaccaaccgcgtcgacgcc
atcgaccccgcgctccgccgcggcggccggttcgaccgcgaaatcgaaatcggcgtcccc
gacaaggacggccggacggagatcctccaggtgcacacgcgcggcatgccgctcgcggac
ggcatcgacctcgacgagtacgcggagaacacgcacgggttcgtcggcgcggacatcgaa
tccctcgcgaaggagtccgcgatgaacgcgctccgccgcgtccgcccccagatagacctc
gaatccgaggagatcgacgcggagctcctcgaatccattcaggtcacggaggcggacatg
aaggacgcgctgaagggcatcgagccgtccgcgctccgcgaggtgttcgtcgaagttccc
gacacgacctgggacagcgtcggcggcctcgaagacacgaaagagcgcctgcgcgagacc
atccagtggccgctcgactaccccgaggtgttcgagtcgatggacctcgactccgcgaaa
ggcgtcctcctctacggcccgccgggcaccgggaagacgctgctcgcgaaagcggtggcg
aacgaggcgaactcgaacttcatctccgtgaagggccccgaactcctcaacaagtacgtc
ggggagtccgagaagggcgtccgtgaggtgttcgagaaggcgcggtcgaacgcacccacc
gtggtgttcttcgacgagatcgactccatcgcgggccagcgtggcggaaacatgggcgac
tccggcgtcggcgagcgcgtcgtcagccagctcctcaccgagctggatggcatcgaagac
ctggaggacgtggtcgtggtcgcgacgacgaaccgccccgacctcatcgactccgcgctc
ctccgtcccggccgcctcgaccggcacgtccacgtgcccgtgcccgacgaggacgcgcgc
cgcgccatcctcgaggttcacacgcgcgagaaaccgctggccgacgacgtggatctcgac
acggtcgctgcgcgcaccgacggcttcgtcggcgcggatctggaggcgctcgcccgggaa
gcgacgatgaacgcgacccgcgagttcgtcaactccgtcagccccgaggaagccgtcgag
agcgtggggaacgtccgcgtcacgatggagcacttcgaggacgcgctcgacgaggtcggt
gcgagcgtggacgcggaggttcgcgagcagtacgaggagatcgaagaacgcttccagaag
gcggaaagtccggacgaagaagagttcgcgagcgggcacgcgttccagtaa
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