Salarchaeum sp. JOR-1: FQU85_13110
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Entry
FQU85_13110 CDS
T06128
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salr
Salarchaeum sp. JOR-1
Pathway
salr03420
Nucleotide excision repair
salr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FQU85_13110
03430 Mismatch repair
FQU85_13110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salr03400
]
FQU85_13110
Enzymes [BR:
salr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FQU85_13110
DNA repair and recombination proteins [BR:
salr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FQU85_13110
MMR (mismatch excision repair)
Other MMR factors
FQU85_13110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF746
AAA_11
AAA_12
DUF3189
Motif
Other DBs
NCBI-ProteinID:
QDX41796
UniProt:
A0A518SEH4
LinkDB
All DBs
Position
complement(2329769..2332915)
Genome browser
AA seq
1048 aa
AA seq
DB search
MPSLPLSEDAFISLLEEANRERFDDEDWEFNDSQERSILAGDGPLWITAGPGSGKTEVLI
SRTLKLLLVDDVAPGSILLTTFTEKAAQNLEERIVDRLNRFGFEDDVDVNEIHIGTLHSL
CNDIMQEYRYPAYANTELLDEDGQQLFMYNNCDFVSVLQGNADAENWETVSSDELSEDAW
EFFEKVLPRGVSPQYGPNKWQATDGASQIFNRVSQYLADTEALRRAPEPEWRVCAEGLER
YRETLQENHRCDFARLLERFIDFIGSEAGSRFIQGEPERERPPLEHILVDEYQDTNPLQQ
ELYFRLTEELDSPNLTVVGDDDQALYRFRGGTVECLIQFPERAEERFGESVQREQLNTNY
RSTEDIVDWCNRYMNEYPLMQREGARAPNKESMDVGREETGERKSVKSLLIGDSDEHPAE
TAAELVEELHDEGYIEDYSQVAFLFKSTKETSRWAGKYAEALRDRDIPVHNPRNKAFLEQ
EEVQFALSAVIRCLDPELEGVEAARVMGRVKGQIEDWHEEFDEFVDDHDATELDSYVRRK
RRELRRAGDSESLGYTVLELLYRILSFEPFQTWIETPDRPERGKRLGRLSKLFDSFASIT
GPEHMQKSSRTLSVSTQFLGSFYYVFCGYLEASDFDEPEDPHDQIPDGFVQMMTVHQAKG
LEFPVTFVSDLDSEPWTGGTYWLEDQLEPYADIHPTGTTDERANRDEIRRFYVAYSRAED
DLLLLDQEGATTDLSLGYTEQGDPLTENWFTGAREIESADDFLNLVGGSVGPHSDVGLKR
RYSITGDVLAYRRCKRQYGYYNELDFAPNHVTQLFFGRVVHETLDRAHRHYAGEIEDIDE
GTIPTDDEIATYFREVAEALKARNIYPMSQEAEDTALSYIQRFNRKEGERLYPRVVDTEH
RLQSNRDDFVLEGVVDVLAGDDVDGYEIWDYKAGQRPDGSRELNDYQAQLNTYAELYRYQ
QGKYPERGVIYFLGEDDRDNAVFELNFQEGSVESSLSAFEETVDDIEQDREGGDWFDISP
ADAPSEGTCSECDLRWNCPARPEYHGSQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgccatctctcccgctttctgaggacgccttcatctcgttactggaagaagcgaacaga
gagcgattcgatgacgaggactgggaattcaacgacagccaagagcggtcgatactcgcg
ggcgacgggccgctttggattactgcgggaccgggaagtggaaaaaccgaggtgctgatc
tcgcggacgctcaaactccttctcgttgacgacgtcgctccgggaagtatcctcctcacg
acgttcaccgagaaggccgctcagaacctggaagagcggattgttgaccggttgaaccga
ttcggattcgaggacgacgtcgatgtcaacgaaatccacatcgggacccttcactccctc
tgtaacgatataatgcaggagtatcggtatcccgcctacgcgaatacagaactcctcgac
gaagacggtcagcagctcttcatgtacaacaactgtgacttcgtgtccgttctccaaggg
aatgccgacgcagagaactgggagacggtctcttcggacgaactatcggaagacgcgtgg
gagtttttcgagaaggtgctgccgcgcggcgtcagccctcagtacggcccaaacaagtgg
caggcgaccgatggtgcttctcagatattcaatcgggtgtcccagtacttggcggacacg
gaggctctgcgtcgcgccccggaacccgagtggcgggtctgcgctgagggacttgagcga
taccgcgagactctacaggagaatcaccgatgtgactttgcccgccttctagagcggttc
atcgacttcataggaagcgaggccggcagccggttcattcaaggggaaccggagcgcgag
cgcccgcctctcgaacacatcctcgttgacgagtaccaggacacgaatccgcttcagcaa
gagctctacttccgattgacggaggagctcgatagtccgaatctaaccgttgtcggtgac
gatgaccaggctctgtatcgcttcaggggcggtaccgtggagtgtctgattcagttcccg
gagcgcgctgaggagcgatttggtgaatccgttcagcgggagcagttgaacacgaactac
cgctctacggaagatatcgtggactggtgtaaccgatatatgaacgagtaccccctcatg
cagcgagagggggcacgcgctccgaacaaggagtcgatggacgtgggccgggaggagacg
ggggaacggaagagtgtcaagtcgctcctgatcggtgacagtgacgaacatcccgcggaa
acagcggctgaattagtcgaagagctccacgacgaagggtacatcgaggattacagccaa
gttgcgttccttttcaagagcacgaaggagacctcccgatgggccggcaaatacgcggaa
gctctccgggatcgggatattcccgttcacaatcctcgaaacaaggcgtttctggaacag
gaggaagtccagttcgcgctgagcgctgttattcgctgtctcgatcccgaactggaggga
gtggaagcggcacgcgttatgggccgagttaagggacagatcgaggactggcacgaggaa
ttcgatgagttcgttgacgaccacgatgcgacagagctggacagttacgtccgcaggaaa
cggcgcgaactcagacgtgcaggtgacagcgagtcgctgggatacaccgtcctcgaactt
ctctaccggatcctctcgttcgagccattccagacatggatcgagactcccgatcgcccg
gagcgagggaagaggctcggtcgcctctccaagttgttcgactccttcgccagtatcacc
ggaccggaacacatgcagaagtcttcgagaacgctgtccgtatcaactcaattcctcggc
tcgttctactacgtgttctgcgggtacctggaggcgtccgatttcgacgaaccagaggat
ccccacgaccagatcccggacggcttcgtacagatgatgaccgttcaccaggccaagggc
ctcgaattcccggtgaccttcgtcagtgacctggacagcgaaccttggacgggcggcacc
tactggctggaggaccaattagagccgtatgccgacatacacccgactggaactactgac
gagagagccaatcgagacgagatccgccgcttctacgtggcgtactcccgagcggaggac
gacctacttctacttgaccaagagggggcgacgactgatctctccctgggttataccgaa
caaggtgaccctctgacagagaactggttcacaggggccagagaaatcgaatccgctgac
gacttcctcaacttggtgggtggaagtgtcggcccccacagcgatgtcgggctgaaacgc
aggtatagcatcaccggtgacgtcctagcctaccgccggtgtaagcgccagtacgggtat
tacaacgaactcgatttcgcacccaaccacgtcacacagctcttcttcggacgagtggtc
cacgaaacgctggatagagcacaccgacactacgcgggtgaaatcgaggacatcgacgaa
ggcacgatcccgaccgacgacgagattgccacgtacttccgcgaggtggccgaagcgctg
aaagcccggaatatctatccgatgagccaagaggccgaagacactgcgctctcgtacatc
caacgcttcaacaggaaggaaggcgagcggctctacccgcgagtcgttgacaccgaacac
cgccttcagagcaaccgggatgacttcgttctggaaggggtcgttgacgttctcgcgggg
gacgacgtagacggttacgagatctgggactacaaggcgggacaacggccggacgggagt
cgggagctgaacgactaccaagcccagctgaacacctatgcagaactataccgctatcag
cagggcaaatatcccgagaggggagtcatctactttttgggagaagacgatcgagacaat
gcggtcttcgaactcaatttccaagagggctcagtggagagttcactctccgctttcgaa
gaaaccgtagatgacatcgaacaggatcgagaaggcggcgattggttcgacatatctccc
gcggacgcgccatctgagggaacctgttccgagtgtgatttacgctggaactgtcccgcc
cgtcctgaataccacggctcgcagtag
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