Streptomyces albus: SLNWT_5284
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Entry
SLNWT_5284 CDS
T03823
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sals
Streptomyces albus
Pathway
sals03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sals00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLNWT_5284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sals03019
]
SLNWT_5284
03009 Ribosome biogenesis [BR:
sals03009
]
SLNWT_5284
Enzymes [BR:
sals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
SLNWT_5284
Messenger RNA biogenesis [BR:
sals03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SLNWT_5284
Ribosome biogenesis [BR:
sals03009
]
Prokaryotic type
rRNA processing factors
SLNWT_5284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AJE85660
UniProt:
A0A0B5F233
LinkDB
All DBs
Position
6169896..6173918
Genome browser
AA seq
1340 aa
AA seq
DB search
MLEPTEPTGSSVGQDKDSPSDTLPPRRRRRAASRPAGPPAAEPKAAAATGAEASAPAEDV
AETEEETPAVAETAATGEAATGAATTEEATASTAQTAEAPAAEAAPPARTRRRATRRASA
PAGAPQSASADSAPAPAESAPAAEAPAAEAPAAQAPAKAAKAAKAAKTAEPAKTGEAAEP
AVAEEEDAAPRRSRRRATRRVSAPAAEALAAEAQTAAPAALDTEGLAATDDLPGAETTQV
PSGPAAPAAQSGQDAKSGQGAKSGRDDKDAPAEAAEAEEDAGPRRGRRRATRKAAGGFSE
PARKKAARAAEESEGEDAAPPARPAVAVFRAPVFAEPMFQTPESAAAAAAAAAVEEQPAE
EAPAEDDRAEADRAEAEDSGSGRRRRRRRAVSESQAPAEQDSAESAGSAESAESADGDED
SGDAEDGDGDGSEESGSRRRRRRGGRRRRRGESADQAEGEDGSGDSQDREDSGSEDSAGE
DGSEDDSEDGGYESGSSSSRRRRRRRRRAGDGSEPASPGDGDPERTVVKVREPRERRAKD
EPGTGADEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQS
GERTQIGILEDDVLVEHYVNKEQSTSYVGNVYLGKVQNVLPSMEAAFIDIGKGRNAVLYA
GEVNFEALGMSGGPRRIESALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEG
SMTGISRKLPDTERSRLKSILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQSQWSDIQ
KKAKSSSSNAPTLLYGEPDMTVRVVRDIFNEDFSKVVVSGEEAWETIHGYVAHVAPDLAG
RLSKWTSETDVFASHRIDEQLMKALDRKVWLPSGGSLVIDKTEAMIVIDVNTGKFTGQGG
NLEETVTRNNLEAAEEIVRQLRLRDLGGIVVIDFIDMVLESNRDLVLRRLLECLGRDRTK
HQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQPTTSGGGGKRGKKRG
KGGGEQTHDHHEHTAQEQKEPAEEPAETAAEVAAEAAAPAALPEPEFRPDEELYSSVAEA
EAAAGRGRGRRRASRRASAPAGAPKSESKGRTDKAEPQAGTSVSEVHEQPAEAAAPVAEP
VAEPAPAAASAPAAEPAARPEDEASAAPKGRTRRRATRKVTAPAGSPEGAGEAEAAVVTV
AEPAPKAAEPEPAPEAEPAPAESAAPARPRRRAVRTASAPAGSEDSAVTVVTGAPAAESA
EAESAPEGEEAAPAKKAARKTAKKATAKKAATPAKKAAAKKTAAKKTTAKKATTAKKATK
KTVAAEQSAPAVTASAEDGA
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagccgaccgaacccacggggtcctccgtgggacaggacaaggattcccccagc
gacaccctgccgccccgccgcaggcgccgcgccgcctcccggcccgcgggaccgcccgcg
gccgagccgaaggcggccgccgccaccggcgccgaggcgagcgccccggccgaggacgtg
gcggagaccgaggaggagactccggcggtggccgagacggccgcgaccggggaagccgcc
acgggggcagccaccacggaggaggccaccgcctccaccgcccagaccgccgaggcaccg
gccgccgaggccgcgcccccggcccgtacccgccgccgcgccacccgccgggcctccgct
ccggccggtgccccgcagtcggcgtccgccgactccgccccggcacccgccgagagcgcg
cccgccgccgaggccccggccgccgaagcgcctgccgcgcaggctcccgccaaggctgcc
aaggctgccaaggctgccaagaccgccgagcccgccaagactggcgaggctgccgagccc
gccgtggccgaggaggaggacgcggccccgcgccgttcccgccgccgcgccacccgccgg
gtgagcgcgcccgccgccgaggcgctggccgccgaggcgcagaccgcggccccggccgcc
ctcgacaccgaggggctcgcggccaccgacgaccttcccggcgccgagaccacgcaggtg
cccagcggcccggccgccccggccgcgcagtccggccaggacgccaagtccggtcagggc
gccaagtccggccgcgacgacaaggacgccccggcggaggccgccgaggccgaggaggac
gcggggccgcgccgtggccgccgccgtgccacccgtaaggccgccggaggcttctccgag
ccggcccgcaagaaggccgcgcgtgcggccgaggagagcgagggcgaggacgccgcgccg
cccgcgcgtccggcggtcgccgtcttccgggcgccggtcttcgccgagccgatgttccag
acccccgagagcgccgcggccgctgccgccgccgcggccgtcgaggagcagcccgccgag
gaggccccggccgaggacgaccgcgccgaggcggaccgtgccgaggccgaggacagcggc
tccggccgccgtcgccgccgccggcgcgcggtctccgagagccaggcgcccgccgagcag
gactccgccgagagcgccgggtccgccgagagcgccgagtccgcggacggcgacgaggac
tccggcgacgccgaggacggggacggggacggctccgaggagtccggctcccgccgtcgc
cgccgccgcggtggccgtcgccgccgtcgcggtgagagcgccgaccaggccgagggcgag
gacggttccggcgacagccaggaccgcgaggacagcggctccgaggactccgcgggcgag
gacggttccgaggacgactccgaggacggcggctacgagtccggctcctccagcagccgc
cgtcgccgccgtcgccgccgccgcgcgggcgacggctccgagcccgcctcgcccggcgac
ggcgacccggagcgcaccgtggtcaaggtccgcgagccccgggagcgccgcgccaaggac
gagcccggcaccggcgccgacgaggtgcagtccatcaagggctccacccgtctggaggcg
aagaagcagcgccgccgcgagggccgcgagcagggccgccgccgcgtcccgatcatcacc
gaggccgagttcctcgcccgccgcgaggccgtcgagcgcgtcatggtcgtccgccagagc
ggcgagcgcacccagatcggcatcctcgaggacgacgtgctcgtcgagcactacgtcaac
aaggagcagtcgacctcgtacgtcggcaatgtctacctcggcaaggtgcagaacgtcctg
ccctcgatggaggccgccttcatcgacatcggcaagggccgcaacgccgtcctgtacgcg
ggcgaggtcaacttcgaggcgctcggcatgtccggcggtccgcgccggatcgagtcggcg
ctcaagtccggccagtccgtgctcgtccaggtcaccaaggacccgatcggccacaagggc
gcccgcctgaccagccaggtctcgctgcccggccgctacctggtgtacgtgcccgagggc
tcgatgaccggcatcagccgcaagctcccggacaccgagcggtcccgcctcaagagcatc
ctcaagaagatcgtccccgaggacgcgggcgtgatcgtgcgcaccgccgccgagggggcc
agcgaggacgagctgcgccgtgacgtggagcggctccagtcgcagtggtccgacatccag
aagaaggccaagagcagctcctcgaacgccccgacgctgctctacggcgagccggacatg
accgtccgcgtggtgcgcgacatcttcaacgaggacttctcgaaggtcgtcgtcagcggc
gaggaggcctgggagaccatccacggctatgtcgcgcacgtggccccggacctcgccggg
cggctgagcaagtggacctcggagaccgatgtcttcgcgagccaccggatcgacgagcag
ctgatgaaggcgctcgaccgcaaggtctggctgcccagcggcggttcgctggtcatcgac
aagaccgaagccatgatcgtgatcgacgtcaacaccggcaagttcaccggtcagggcggc
aacctcgaggagaccgtcaccaggaacaacctggaggcggccgaggagatcgtgcgccag
ctgcggctgcgcgacctcggcggcatcgtggtcatcgacttcatcgacatggtcctcgag
tccaaccgggacctggtcctgcggcggctcctcgaatgcctcggccgggaccgtacgaag
caccaggtcgccgaggtgacctcgctcggcctggtccagatgacccgcaagcgcgtcggc
cagggcctcctggagtccttctccgagacctgcgtccactgcaacggccgcggcgtgatc
gtgcacatggagcagccgaccacctcgggcggcggcggcaagcgcggcaagaagcgcggc
aagggcggcggcgagcagacgcacgaccaccacgagcacaccgcgcaggagcagaaggag
cccgccgaggagcccgcggagaccgccgccgaggtggcggccgaggccgccgcgccggcc
gccctccccgagcccgagttccggccggacgaggagctgtacagctccgtcgccgaggcg
gaggccgccgcgggccgcggccgtggccgccgccgggcctcccgccgtgcctcggcaccg
gccggtgcgcccaagtccgagtccaagggccggacggacaaggcggagccccaggccggg
acctccgtgagcgaggtgcacgagcagcccgccgaggccgcggccccggtggccgagccc
gtggcggaaccggcgcccgccgccgcgtccgcccccgcggccgagcccgccgcccggccc
gaggacgaggcgtccgccgcgcccaagggccgtacccgccgccgggccacccgcaaggtg
acggcaccggccggttcgcccgagggcgccggggaggcggaggccgcggtggtgaccgtg
gccgagcccgccccgaaggccgccgagccggagccggcccccgaggccgagcccgcgccc
gcggagtccgccgccccggcccgtccccgccgccgcgcggtgcgcaccgccagtgcgccc
gccggttccgaggacagcgcggtcacggtggtcaccggtgcccccgccgcggagtccgcc
gaggcggagtccgcaccggagggcgaggaggccgctccggcgaagaaggccgcccgtaag
acggccaagaaggcgacggcgaagaaggccgcgacccccgccaagaaggcggcggccaag
aagaccgccgccaagaagacgacggcgaagaaggcgacgaccgccaagaaggccaccaag
aagacggtcgctgcggagcagagcgccccggcggtcaccgcttcggccgaggacggtgcc
tga
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