Streptomyces albus: SLNWT_5407
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Entry
SLNWT_5407 CDS
T03823
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sals
Streptomyces albus
Pathway
sals02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sals00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SLNWT_5407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sals03021
]
SLNWT_5407
Transcription machinery [BR:
sals03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLNWT_5407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_28
PolyA_pol_arg_C
DUF6604
Motif
Other DBs
NCBI-ProteinID:
AJE85783
UniProt:
A0A0B5ESL8
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Position
6314699..6315844
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AA seq
381 aa
AA seq
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MQTQTLSESEPAALVDAETGAIASVPAQSPAARHPENPPGEGPEPESEAEPGAEAGPGAE
DEEAPAASAGARSRQDGGGPSSDLFRQYLREIGRIPLLTAADEVELARRVEAGLFAEEKL
LTTADLDSSLAHDLDRLVVRGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLG
LIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVIRVQRRLL
QEHGTEPSPEQVGAQLDLTPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASP
VESAAFLLLREHLDAVLSTLGERERKVVQLRYGLDDGRPRTLEEIGRLFGVTRERIRQIE
SKTLSRLREHAFADQLRGYLE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctgagcgagtccgaaccggccgcgctcgtcgacgcggagaccggg
gcgatcgcctcggtacccgcccagagccccgccgcccgccaccccgagaacccgccgggc
gaaggacccgagccggagagcgaagccgagccgggagccgaggcgggccccggcgcggag
gacgaggaggcgccggccgcctccgcgggggcgcgttcccgccaggacggcggcggcccc
tcctccgacctgttccgccagtacctgcgcgagataggccggatacccctgctgaccgcc
gccgacgaggtggagctcgcccgccgggtggaggcgggcctcttcgccgaggagaagctc
ctgaccaccgccgacctcgacagcagcctcgcgcacgacctggaccgcctggtggtccgg
ggccggatggccaagcgccgcctgatcgaggcgaatctgcgcctggtggtctcggtcgcg
aagcggtacgtgggccgcgggctgaccatgctcgacctcgtacaggagggcaatctcggc
ctgatccgcgccgtcgagaaattcgactacgcgcgtggctacaagttctcgacgtacgcg
acctggtggatccggcaggcgatgtcgcgtgccctcgccgaccaggcccgcaccatccgg
gtgccggtgcacgtggtcgagctcatcaaccgcgtgatccgcgtccagcgccgcctgctc
caggagcacggcaccgaacccagcccggagcaggtcggcgcccagctcgacctgaccccc
gagcgcgtcagcgaggtgctgcgcctggcccaggagccggtctcgctgcacgccccggtc
ggcgaggaggacgatgtcgcgctcggcgacctgatcgaggacggcgacgccgcgtccccg
gtggagtcggcggccttcctgctgctgcgcgagcacctcgacgccgtcctctccaccctc
ggcgaacgcgaacgcaaggtcgtccagctgcggtacgggctcgacgacggcaggccgcgc
accctggaggagatcggccgcctcttcggggtgacccgcgaacgcatccggcagatcgag
tccaagaccctcagccgcctgcgcgaacacgccttcgcggaccagctcaggggctatctg
gagtga
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