Salegentibacter sp. T436: AO058_02340
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Entry
AO058_02340 CDS
T04614
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03030
DNA replication
salt03430
Mismatch repair
salt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AO058_02340
03430 Mismatch repair
AO058_02340
03440 Homologous recombination
AO058_02340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salt03032
]
AO058_02340
03400 DNA repair and recombination proteins [BR:
salt03400
]
AO058_02340
Enzymes [BR:
salt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AO058_02340
DNA replication proteins [BR:
salt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AO058_02340
DNA repair and recombination proteins [BR:
salt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AO058_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
APS37787
UniProt:
A0A1L6QZS1
LinkDB
All DBs
Position
complement(549618..554009)
Genome browser
AA seq
1463 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPLTDSDNWPRCIQIAWQLHDEMGRLVESQDYLVKPEGFNIPY
DAEKVHGISTELAAEEGISLTEMLEKFQEALNKTKFVVGQNVGFDLNIMGAEFHREAMEN
NLQELPVLDTCTEVTAQMCKIPGGRGGKFKLPTLTELHEFLFDEPFGEAHNATADVEATT
RCFLELVRQRAFTKEQLDVPADYFENFSEANPQPIELIGLKHINLKKASEEIRKRLQKQQ
PTSEITTEEIEENLEKLDEVPFSHLHNHSQFSVLQSTISIKDLVNVAAENNMPAVALTDH
ANMMGAFHFVKEIGDYNKAIRAKNEEAVANNEPAEARELKAIVGCEFFVCENHADKSRKD
NGYQVVMLAKNKRGYHNLAKMSSKAYTDGFYYVPRIDKEIIKEYKEDIIVLTGNLYGEVP
SKVLNVGENQAEEALLWWKEEFGEDLYIEIMRHDQEDENRVNTVLVDFAKKHNVKLVASN
NTYYCAKEDANAHDILLCIKDGEKQATPIGRGRGYRYGLPNQEYYFKSGEEMKNLFKDLP
QAISNVQEVVDKIEPFELARDVLLPAFTIPEEFLVEEDKNDGGKRGENAYLKHITFVGAK
ERYGELTPDIEDRLNFELSVIENTGYPGYFLIVEDFIREARNLDVSVGPGRGSAAGSAVA
YCLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIQKYGANQVAQII
TYGTMAAKSSIRDTARVLDLPLGDADRISKLIPTMSKLGKIFGMDEKELKKKFRSEDLEK
VNELLNIAEGDDLEAQTVNQARILEGSVRNTGIHACGVIITPGDITNYVPVSVAKDSDLY
VTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVQIVKGRHNIDLVPDEFPLDDEETYKLFQ
RGETVGIFQYESPGMQKHMKDLKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGDEEIAY
DLPEMEEYLQETYGITVYQEQVMLLSQKLAGFSKGEADVLRKAMGKKIFALLEQLKPKFL
DGGEAKGHPRDVLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLDVLGPDVNESFYKFSVNKDYAVRFGMGAIKGVGSGAVAT
IVENRRTEAGPYKSIFDMAKRIDLRSANKKAFENLALAGGFDGFGDTHRAQYFHDDGGGI
TFLEKVIKYAAKFQENENSSQVSLFGEASEVQIPEPVVPPCEEWGTMEKLRREREVVGIY
ISGHPLDDFRYEMDYFCNSKLGEFNDLERCVNRDLTFGGVISDVQHRVSKMGKGWAMFSV
EDYTDTYEFRMFGEEYLKFRHFLVPNSFVHIKIFVKEGWTNKETGKKGEPRIQFNNIYLL
HDVMDQFAKKLTIQLDIADLHEEKINWFKDVFRTHRGDHKLNFVVYEMKEQVKLHMPSKK
QKVKISQELLHTLEDEQVMYKLN
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttatttttgataccgaaactaccggtcttcccaaacgctgggatgctccttta
accgattctgataactggccaagatgtatacaaattgcctggcagttacatgatgaaatg
gggcggcttgttgaaagtcaggattatctggtaaagcccgaaggtttcaatattccatac
gatgctgaaaaagtccacggaatttctaccgagcttgctgctgaagaaggaatctcttta
actgaaatgctagagaaattccaggaagcgctgaataaaaccaaatttgtagtagggcaa
aatgtaggttttgacctgaatattatgggggccgaattccatagggaagcgatggaaaat
aacctccaggagttaccggttttggatacctgtaccgaagtaaccgcacaaatgtgtaaa
atccccggtgggcgtggcgggaaatttaaattacccaccttaaccgaattacacgaattt
ttattcgatgaaccttttggcgaagcccataatgccactgccgatgtggaggcaactacc
aggtgttttttagaattagtgcgtcaaagagcttttacaaaggagcagcttgatgtacct
gcagattattttgagaatttttcagaagctaatccgcagcctatagagcttattggatta
aaacacattaaccttaaaaaggcctccgaagaaataagaaaaaggcttcaaaagcaacaa
cctacttcagaaatcactactgaagaaattgaggaaaaccttgaaaagcttgatgaggtt
cctttttcgcatttacataaccattcacagttttcggttttacagtctacaattagtata
aaagatcttgtaaatgttgctgcagaaaataatatgcctgctgtagcgcttacagatcat
gcaaatatgatgggcgcttttcattttgtaaaagaaattggcgattataataaagcaatt
agagcaaaaaatgaagaggcagttgccaataacgaaccggcagaagccagggaattaaaa
gctattgtaggctgtgaattttttgtttgtgaaaatcacgctgataaatcccgaaaggat
aatggctaccaggtagtaatgttggccaagaacaaaagaggctatcacaacctggccaaa
atgtcttctaaagcttataccgatgggttttattatgtgccgcgaattgataaggagatt
ataaaggagtacaaagaagatattattgtacttaccggtaacctttacggggaagtgccg
agtaaggttttaaatgttggagaaaaccaggctgaagaagctttgctttggtggaaagaa
gaatttggcgaagatctttacatagagatcatgcgtcacgaccaggaagatgaaaatcgt
gtaaatacagtgctggtagattttgctaaaaagcataatgtaaaactggtggctagtaat
aacacctattattgtgcgaaagaagatgccaacgcccacgatattttattgtgtataaaa
gacggcgagaagcaggcgactccaataggtcgtggtcgtggttaccgttatggtttgcca
aaccaggaatattattttaagagtggcgaagagatgaaaaatctctttaaagacctacct
caggccattagtaatgtgcaggaggttgtagataagattgagccttttgagctggctcgt
gatgtacttttacctgcatttaccattcctgaagaatttttagttgaggaagataaaaac
gatggtggtaaacgaggggagaatgcatacctgaaacatatcacttttgttggtgctaaa
gagcgctacggggaactcactcccgatattgaagaccgacttaattttgagctttcggtt
attgaaaataccggttatccaggctattttcttattgtagaagattttattcgcgaggcc
cggaatctggatgtttcggttgggcccggccgtggttcagcggctggaagtgccgttgcc
tattgtttaggaattaccaatatagaccccattaaatacgatctgctttttgagcgtttc
ctaaatcccgatcgtgtaagtatgcccgatattgatattgactttgatgatgaaggtcga
agccgggttatggattatgtaattcaaaaatatggtgctaaccaggtggcacagatcatc
acctacggaaccatggctgctaaatcttccattcgagataccgccagggtgctggatctt
cctttaggagatgccgataggatctcgaaattgatccctaccatgtcaaagctcgggaag
atctttggaatggatgagaaggaactcaaaaagaaattcaggagtgaagatctggaaaaa
gtaaacgaacttttaaatatagctgaaggggatgacctggaagcacaaacagtaaaccag
gcgagaattcttgaaggctcggttaggaataccgggattcacgcttgtggggtgattatt
actccgggagatattactaattatgtgccggtttcggtagcaaaggattccgatctttat
gttacacagtttgataactcggttgtagaaagcgccggactactaaaaatggactttttg
gggttaaagacgttaaccttgattaaagatacggttcaaattgtaaaaggcaggcataat
atagatttggtgcccgatgaatttccgttagatgatgaagagacttacaagcttttccaa
cgtggggaaacggtagggatttttcaatatgaatcgccgggaatgcagaagcatatgaaa
gatcttaagccaacggtttttgatgatcttattgctatgaatgcattgtaccgtcccggg
ccaatggaatatatcccgagttttattgcccgaaagcacggcgacgaggaaattgcctac
gatttacctgaaatggaagaatacctccaggaaacctacggaattacggtttaccaggag
caggtgatgttactttcgcaaaagctggccggctttagtaaaggtgaagccgatgtttta
cgtaaagcgatgggtaaaaagatcttcgctttgctggagcaattaaagccaaaatttttg
gatggtggtgaagcaaaaggtcatccaagagatgttttagagaagatttggaaagactgg
gaagcttttgcagcttatgcttttaataaatctcactctacctgttatgcctggattgct
taccaaaccgcctatttaaaagcgcattatcctgcggaatatatggcagcggtgctttct
aataatatgaacgacattaagcaggttactttctttatggaagaatgtaagcgaatgaag
cttgacgtgttggggccagatgtgaatgaatctttttataagttttcggtaaataaagat
tatgccgttcgttttggaatgggcgctataaaaggtgtgggttccggtgcggttgctact
attgtagaaaaccgaagaacagaagctggaccatataaatctatttttgatatggcgaaa
cgtatcgatttgcgttcggctaataaaaaagcttttgaaaatcttgctttagcgggcggt
ttcgacggatttggagatacacaccgtgcgcaatattttcacgatgatggcggcggaatt
accttcttggagaaagtgataaaatatgctgcaaaattccaggaaaatgaaaactcttcc
caggtcagtttatttggggaagccagtgaggtccaaattcccgaacctgttgtgccgcct
tgtgaagagtggggcactatggaaaaactgagaagagaacgggaagtggtaggaatctac
atttcgggtcacccgctggacgattttaggtatgagatggattatttctgtaactccaaa
ttgggagaatttaatgatttggaaagatgcgtaaaccgtgacctaacttttgggggtgtg
attagtgatgtgcagcacagggtttcaaaaatgggtaaaggctgggcgatgttttcggtt
gaagattataccgatacctatgagtttaggatgtttggagaggaatatttaaaattcaga
cattttttggtgccgaattcttttgtgcatatcaagatctttgtaaaagaaggctggacc
aataaagaaaccggtaaaaagggagagccaagaattcagttcaataacatttatttgctg
cacgatgtgatggatcaatttgcgaaaaagctaacgattcaactggatattgccgatctg
cacgaggagaaaatcaattggtttaaagatgtttttagaacccacagaggtgaccataaa
ctgaattttgtggtttatgaaatgaaagaacaggtgaaattacatatgccgagcaagaaa
caaaaagtaaaaatatcacaagagcttttacatactttggaagatgaacaggtaatgtat
aagttgaattga
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