Salegentibacter sp. T436: AO058_04930
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Entry
AO058_04930 CDS
T04614
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AO058_04930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salt03400
]
AO058_04930
Enzymes [BR:
salt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AO058_04930
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AO058_04930
DNA repair and recombination proteins [BR:
salt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AO058_04930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
HBB
Ribosomal_S13
Zn_ribbon_6
CoiA_N
Motif
Other DBs
NCBI-ProteinID:
APS38268
LinkDB
All DBs
Position
1128488..1129270
Genome browser
AA seq
260 aa
AA seq
DB search
MPELPEVAYQKKYADATILHKKIVKVETGDKKIYQSDKNEFEETLKDNQFIGSERLGKYL
FLNLKNKGVLVVHFGMTGKLEYYQHEEIPKYAQLTLTFEDHSRVSFTCPRKFGKLYLAEN
LAEFQKENDLGVDALALTKEQFFEILKGKTGTIKALLMNQKLIAGIGNLYADEILFQVKI
HPVTKVNELSEKDKLKIYNKIEEVLEVVKKVREEGQKLPESYITTVRKKGADCPRNNGKI
EQIKVSGRTTYFCPTCQREK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacccgaagttgcctatcagaaaaaatatgccgatgctactattctgcat
aagaagatcgtaaaagtagagaccggcgataagaaaatataccagtcggataaaaatgaa
tttgaggaaaccctaaaagacaatcaatttattgggagtgaacgtttaggaaaatatctt
ttcctgaatttaaaaaataaaggagttttggtggtacattttgggatgaccggcaaactg
gagtattatcaacacgaagaaatacctaaatatgcacaactcacgcttacttttgaagat
cattcccgggtttcttttacctgtccgcgtaaatttggaaaactttatttagctgaaaat
ttagctgaatttcagaaagagaacgatctgggagttgatgcacttgcccttacaaaagaa
cagttcttcgaaattttaaagggtaaaaccggtacgataaaagctctgctaatgaatcaa
aaactcatcgccggaattgggaatttatatgccgatgaaatattatttcaggttaaaatt
catccggtcacgaaagttaacgagctctctgaaaaagataaattaaagatttacaataaa
attgaagaagtactggaggtagttaaaaaagtcagggaagaagggcaaaaactacccgaa
agctatatcactaccgttcgtaaaaaaggtgccgattgtcccaggaataacggtaaaata
gaacaaattaaagtttctgggagaaccacttatttttgtcccacttgtcaaagggagaaa
taa
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