Salegentibacter sp. T436: AO058_08415
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Entry
AO058_08415 CDS
T04614
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03420
Nucleotide excision repair
salt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AO058_08415
03430 Mismatch repair
AO058_08415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salt03400
]
AO058_08415
Enzymes [BR:
salt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO058_08415
DNA repair and recombination proteins [BR:
salt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AO058_08415
MMR (mismatch excision repair)
Other MMR factors
AO058_08415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
BBS2_hp
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APS38892
LinkDB
All DBs
Position
1917233..1919554
Genome browser
AA seq
773 aa
AA seq
DB search
MEAYLAELNDAQRAPVLQKDGAMIVIAGAGSGKTRVLTYRIAYLMSQGVDPFNILSLTFT
NKAAREMKTRIAKIVGNSEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSQSV
IRAIIKDMRLDKDVYKYKQVYSRISSYKNSLITVKAYFQNPELKEADAMSKKPRLGEIYQ
EYVERCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSTKNIVNAANS
IIEKNKTKLEKIVWTANDEGPKIVVNRLLTDGEEGRFVAGSIFENRMQNQMSNGDFAILY
RTNAQSRAMEDALRKKEIPYRIYGGLSFYQRKEIKDVLSYLRLLINPKDEEALKRIINYP
ARGIGQTTMDRLSIAGNQYGKTIFEIIENIDHLDLKINKSTQTKLNNFVNMIKSFTILAE
NADAFTVADTVAKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFVEGQKELADADGSL
AEFLEDVALATDMDKDTGDDDRVALMTIHLAKGLEFPYVYIVGLEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLVDAEPSRFIEEVDEQYMDYMIPQDDYK
YKPLIDTDIFGDDIDKSKLRQSKPKKGTPPPAHKPSESQLRKLRKLKPASPEPQKATNAI
KLEAGNVVEHMRFGKGKVLAIDGIGQDKKAEIDFENGGIKKLLLRFAKLKLIS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcttatttagccgaattaaatgatgcacaacgtgcgcctgtactgcaaaaggat
ggcgcaatgattgtgattgcaggagcaggatctggaaaaacgcgggtgcttacttaccgt
attgcttaccttatgagccagggcgtagatccttttaatattttatcgctaacctttacc
aataaggccgcccgggagatgaaaacccgaatcgctaaaattgtgggtaacagtgaagcg
aaaaatctttggatgggaacttttcactcaatttttgcaaaaattttacggtttgaagcc
gataaattgggttatccgtcaaacttcaccatttacgatactcaagattctcaaagcgtg
atcagggcgattattaaagatatgcgcctggataaagacgtttataaatataagcaggtt
tatagtcgtatttcttcctataaaaatagtttgattaccgtaaaagcttattttcaaaac
ccggaattgaaagaggccgatgcgatgtctaaaaagccgcgtcttggtgaaatttaccag
gaatatgtggagcgttgctttaaagccggtgcgatggattttgatgatcttttgctcaaa
accaatgaactgttaaaccgttttcctgaagtgcttcataaataccagaatcgttttaga
tatattctggttgatgagtaccaggataccaatcattcgcagtatttaattgtaaaagca
ctctcagataaatttcagaatatatgtgtggtaggtgatgatgcgcagagtatttatgct
ttccgcggagcaaatattaataatatcctgaatttccagaaggattatgataacgtacaa
atgtaccggttagagcaaaattaccgttctaccaagaatatcgttaatgcggcaaactct
attattgaaaagaataaaaccaaactggaaaaaatagtttggacggcaaatgatgaaggg
ccaaaaattgtggtgaatcgcctgctaactgatggggaagaaggaagatttgttgccggt
tctatttttgagaaccgaatgcaaaatcagatgagtaatggcgattttgccattctctat
agaaccaacgcgcaaagcagggcaatggaagacgcgcttagaaaaaaggaaattccgtat
agaatttatggtggactttcattttaccagcgtaaagaaattaaagacgtcctgtcttat
ttaagattgctgatcaacccaaaagatgaagaagctttaaagcggataattaattatccg
gctcgaggaattggacaaaccacgatggataggttaagcattgcgggaaatcaatatggg
aaaaccatttttgaaattattgagaatatagatcatctggatctaaagatcaataaaagt
acgcagaccaagctgaataatttcgtgaatatgattaagagtttcacgattttagccgaa
aatgccgatgcctttactgttgcagatactgtagccaaaaaaacaggattggttcaggaa
ttaaagaaagatggtactccagaaggaattgctagaattgaaaatattgaagagttactt
aacgggattaaagactttgtagaaggccaaaaagagctggcagatgctgatggttcttta
gctgaatttctggaagacgtcgccctggctacagatatggataaagataccggtgatgac
gatcgcgtggcgttaatgaccattcacctggcaaaaggactggagtttccttatgtatat
attgttggcttagaagaagatttatttccttcaggaatgagtatgaatacccgaagcgaa
ctggaagaagagcgccgtttgttttatgtagcccttacccgggccgaaaaacaggcttac
ctgacctatacgcagtcacgttaccgctgggggaaacttgtagatgccgaacctagtagg
tttattgaagaagtagacgagcagtatatggattatatgattccgcaggacgattataaa
tataaaccgttgatagatactgatatttttggggatgatattgataaaagcaaacttcga
cagagtaaacctaaaaagggaactccgcctccggcgcataaaccaagcgaatctcagtta
agaaaacttcgaaaattaaaacccgctagtcccgagcctcaaaaagctacaaacgctata
aaactcgaggctgggaatgtagtggagcatatgcgttttggaaaaggaaaagtacttgct
atagatgggatagggcaggataaaaaagccgaaattgattttgaaaacggaggaattaaa
aaattacttttaagatttgctaagctgaaattgatctcttag
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