Salegentibacter sp. T436: AO058_14425
Help
Entry
AO058_14425 CDS
T04614
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
salt
Salegentibacter sp. T436
Pathway
salt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO058_14425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salt03019
]
AO058_14425
03400 DNA repair and recombination proteins [BR:
salt03400
]
AO058_14425
Enzymes [BR:
salt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AO058_14425
Messenger RNA biogenesis [BR:
salt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AO058_14425
DNA repair and recombination proteins [BR:
salt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AO058_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HTH_40
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
zf-CXXC
GerE
Motif
Other DBs
NCBI-ProteinID:
APS39995
UniProt:
A0A1L6R651
LinkDB
All DBs
Position
3276576..3278693
Genome browser
AA seq
705 aa
AA seq
DB search
MENTRVLHTLKEYFGYDSFRPLQKKIIDSVFEGKDNLVIMPTGGGKSICYQLPAILLPEI
TLVISPLIALMKDQVDGLTANGVPAAFLNSSQTESQQQEIFKKIDSKELKLLYVAPESLQ
FVDRFMSDGKISLIAVDEAHCISSWGHDFRPAYTQLGYLKNRFPTTPMIALTATADKATR
EDICRQLNIPNAEKHIASFDRKNLSLDVRPGIKRFEQITNFVKNRKKESGIIYCLSRKNT
EEIAEKLQRKGFEAEAYHAGLPAEKRIEIQDNFINDNSKIICATIAFGMGIDKSNIRWVI
HYNMPKNLEGYYQEIGRAGRDGLPSDTMLFHSYADVVQLQKFASNSGNEEVQLAKLDRMK
QYSEALSCRRKILLSYFGELKQEDCGNCDICKNPPQFFDGTVIAQKALSCIFRLKENEPI
TVLIDVLRGSQNESVFSKNYQEIKTFGIGKDISWHHWQQYIIQLINLGYVEIAFHRGNNL
QLTELAKNVLFEGEKVQLAEVPDRKKLKRREETEVSEKTADNSLFEKLRQLRLKIAREEE
IPAYLIFNDATLKEMEKSRPMTDDEFLQINGVGRQKMQDYGYKFIKEIIAFSKKKRSTKK
RKKANTYKATLDLLNEGLNLEEIAKKRELAITTVYSHLAKLYAENEGVDPMKYISKADFK
AIEKAKTELENPEGLKPYFEHFEEAIDYGTIRLALAILEKQEAEV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacccgggttttacatacgcttaaagaatattttggttacgatagttttaga
ccgcttcaaaaaaagatcattgattcggtttttgaaggcaaagacaacctggtaattatg
cccaccggtggtggaaaatctatttgttaccagcttccggccattttactgccagaaatt
accctggtaatttccccacttattgccttgatgaaagaccaggtagacggacttactgca
aatggtgttcccgcagcatttttaaatagtagccaaaccgaaagccagcaacaggagatc
tttaaaaaaattgattccaaggaattaaaactgctttatgttgccccagaaagtctgcag
tttgtagaccggtttatgagcgacggcaaaataagtttgattgcagtagacgaggcccat
tgtatctccagctggggacacgattttagaccggcttatacgcaactaggctatttaaaa
aatcgctttcccactactccaatgatcgcgctaaccgccacagccgataaagctacgcga
gaagatatttgccgccaattaaatattccaaacgccgaaaagcacatcgcttcattcgat
aggaaaaatctaagtcttgatgtgcggcccggcattaaacgttttgagcaaatcaccaat
ttcgttaaaaaccgaaagaaggaaagtggaattatctactgcctaagtaggaaaaacacc
gaggaaattgctgaaaagctgcagcgaaaaggttttgaagcagaagcttaccacgccggt
ttaccagcagaaaaacgtattgaaattcaggataattttatcaatgataattcaaagatt
atttgtgctaccatcgcttttgggatgggcatcgataaatctaatattcggtgggtaatt
cattacaatatgcccaagaacctggaaggctattaccaggaaattggtcgtgcagggcgt
gacggtctgccttcagacactatgctttttcatagttatgccgatgttgtgcagttgcaa
aaatttgcttccaattcaggaaatgaagaagtgcagcttgcaaagctagatcgaatgaag
caatattcagaagcattaagttgccgccgaaaaatattgctgagttattttggcgaatta
aaacaagaagattgtggcaattgtgatatttgtaagaatccgccgcagttttttgatgga
actgtaatcgctcaaaaagcactttcgtgtattttcagactgaaagaaaacgaaccgatt
actgtgcttatagatgtgcttcgcggttcacaaaacgagtcggttttcagtaaaaactat
caggaaattaaaacctttgggattggaaaagatatttcctggcatcactggcagcagtat
attattcagctaattaaccttggttatgtagagatcgcttttcaccgtggcaataatttg
cagcttaccgaattggctaaaaatgtcctgtttgaaggtgaaaaagtacagcttgctgaa
gttccagaccgtaaaaaactaaaacgaagggaagaaacagaagtttcagaaaaaactgca
gataattccctttttgaaaaactaagacagttaaggttaaaaattgctcgtgaagaagaa
atccctgcttacctcatctttaacgatgcgaccttaaaagaaatggaaaaatcccgccct
atgaccgatgatgagtttcttcaaattaatggtgtgggaagacaaaaaatgcaagattac
ggttacaaattcataaaggaaatcatcgctttcagtaaaaaaaaacgtagcactaaaaaa
cgtaaaaaagcaaatacctacaaagcaactttagatttattaaatgaaggtttaaacctg
gaagaaattgcgaaaaaacgagagcttgcaattactactgtttattcgcatttggcaaaa
ttgtatgcggaaaatgaaggggtagatcctatgaaatatatttctaaagccgattttaaa
gctattgaaaaagctaaaactgaacttgagaacccagaaggtttaaaaccatattttgaa
cattttgaagaagcaatagattatggaacgatcaggttagctttagctattttagaaaaa
caggaagcagaggtttaa
DBGET
integrated database retrieval system
