Streptomyces noursei NK660: DC74_3120
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Entry
DC74_3120 CDS
T03082
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
salu
Streptomyces noursei NK660
Pathway
salu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC74_3120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salu03019
]
DC74_3120
03009 Ribosome biogenesis [BR:
salu03009
]
DC74_3120
Enzymes [BR:
salu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DC74_3120
Messenger RNA biogenesis [BR:
salu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DC74_3120
Ribosome biogenesis [BR:
salu03009
]
Prokaryotic type
rRNA processing factors
DC74_3120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
HC2
Motif
Other DBs
NCBI-ProteinID:
AIA03620
LinkDB
All DBs
Position
complement(3513561..3516872)
Genome browser
AA seq
1103 aa
AA seq
DB search
MPAAAAAEVPAAVAEDEARPARTRRRATRKATAPVAAAPVVEEPAAEEAEEEEEAVAEAV
EAPAAAVAEEEARPARTRRRATRKATAPAGAPQASAEEAAPVAEPAPAAEETVEAEAPRR
RSRRRTERSAAAPVAEAPAARAAEEPASEAPARGRRRAQRPPTAVFQAPVFAEPMFQTPE
SAAAAHAAARQEEAETVVETPEEAPAPSRRRRRRRGEPAEVEAVTPAPVEEPAAAPAEPA
PAAVEAEETEEADEEHVEAGTGDEGERPSRRRRRGGRRRRRGEAADGAEEPFAESGAAED
EEEPEAAEGGEGTEDHPEAGGSSSSRRRRRRRRRSGEGAEADGSHTDDPERTVVKVREPR
KKDEGTGADEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVR
QSGERTQIGVLEDNVLVEHFVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVL
YAGEVNFEALGMANGPRRIETALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVP
EGSMTGISRKLPDTERARLKQILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQWEE
IQKKAKAASTSSPSLLYGEPDMTVRVVRDIFNEDFSKVIVSGDDAWQTIQGYVSHVAPDL
VDRLQKWTSEVDVFATYRIDEQLMKALDRKVWLPSGGSLVIDKTEAMVVIDVNTGKFTGQ
GGNLEETVTRNNLEAAEEIVRQLRLRDLGGIVVIDFIDMVLESNRDLVLRRLLECLGRDR
TKHQVAEVTSLGLVQMTRKRVGQGLLESFSEQCVHCNGRGVLVHMDQPSAGGGKRKKKGK
AGANGAQPEQPAEATTEGAAEPVSAPVAEEEAPELEPVAVTEAQLQPSVDGADEWYGSPA
EAEAAATGRARGRRRVSRKVSAPAGAPKAAAEAAAIVLPAAEPTAPVAEPEPAVEPVAEA
VEAAPVAEPAPARPRRRATRRVSAPAGAPEVAEDAGTIVISAPVTEPAAEPVAEAPEQPA
EVVEGAEAVEPAPAAKKTVKKAAAKKTTAKKAAAKKTTAKKTAAKKTTAKKAAVKKTTAK
KTTTKKTAAKKTAAASAPASAED
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccgccgccgctgcggaggtcccggccgccgtcgcggaggacgaggcccgtccg
gcccgcacccgtcgccgcgcgacccgcaaggcgaccgccccggtcgccgcggcgccggtc
gtcgaggagcccgccgccgaggaggcggaagaagaagaggaagccgtcgcggaggccgtc
gaggccccggccgccgccgtcgcggaggaggaggcgcgtccggcgcgcacccgtcgtcgg
gcgacccgcaaggcgaccgccccggccggtgcgccgcaggcgagcgccgaggaagcggcc
cccgtcgccgagccggcgccggccgccgaggagaccgtcgaggccgaggcgccgcggcgc
cggtcgcgccgccgtaccgagcgctccgccgcggcgccggtcgccgaggcgcccgcggcc
cgtgccgcggaggagccggcgagtgaggcaccggcgcgcggacgccgccgggcgcagcgc
ccgccgacggccgtcttccaggcaccggtcttcgccgagccgatgttccagacccccgag
agcgccgccgccgcgcacgccgccgcgcgccaggaggaggccgagacggtcgtggagacg
ccggaggaggcgcccgcgccgtcgcgccgccgtcgccgtcgccgtggtgagccggccgag
gtcgaggccgtgacgccggcaccggtcgaggagcccgccgccgcgcccgccgagcccgcg
cccgccgccgtcgaggccgaggagaccgaggaggccgacgaggagcacgtcgaggccggg
accggcgacgagggcgagcgtccctcgcgccgtcgccgtcggggcggtcgtcgccgtcgc
cgcggtgaggccgccgacggtgccgaggagccgttcgcggagagcggtgcggccgaggac
gaggaggagccggaggccgccgagggcggggaaggcaccgaggaccacccggaggccggg
ggcagctccagcagccgtcgccgccgtcgccgtcgccggcgcagcggggagggtgcggag
gccgacggctcgcacaccgacgacccggagcgcacggtcgtcaaggtccgcgagccccgc
aagaaggacgagggcaccggcgccgacgaggtccagtccatcaagggctcgacgcgcctg
gaggccaagaagcagcgccgccgcgaggggcgcgagcagggacgccgccgggtgccgatc
atcaccgaggcggagttcctggcgcgccgggaggccgtcgagcgggtgatggtggtccgc
cagagcggcgagcgcacccagatcggcgtccttgaggacaacgtgctcgtcgagcacttc
gtcaacaaggagcaggccacctcgtacgtcggcaacgtctacctcggcaaggtgcagaac
gtcctgccgtcgatggaggccgccttcgtcgacatcggcaagggccgcaacgccgtgctg
tacgcgggcgaggtcaacttcgaggcgctgggcatggccaacgggccgcgccgcatcgag
accgcgctgaagtccggccagtccgtcctggtccaggtcaccaaggacccgatcggccac
aagggcgcccggctcaccagccaggtctccctccccggccgctacctggtctacgtgccc
gagggctcgatgaccggcatcagccgcaagctcccggacaccgagcgggcccggctgaag
cagatcctcaagaagatcgtccccgaggacgcgggtgtcatcgtgcgcaccgccgccgag
ggtgcgagcgaggacgaactgcgccgcgacgtcgagcggttgcaggcccagtgggaagag
atccagaagaaggcgaaggcggcctccaccagctcgccgagcctgctgtacggcgagccg
gacatgaccgtccgggtcgtccgggacatcttcaacgaggacttctccaaggtcatcgtc
agtggtgacgacgcctggcagaccatccagggctacgtctcgcacgtcgcgccggacctc
gtggaccggctgcagaagtggacctccgaggtcgacgtcttcgcgacgtaccggatcgac
gagcagctgatgaaggcgctggaccgcaaggtctggctgcccagcggcgggtcgctggtg
atcgacaagaccgaggccatggtcgtgatcgacgtcaacaccgggaagttcaccgggcag
ggcggcaacctcgaggagaccgtcacccggaacaacctggaggcggccgaggagatcgtg
cgccagctgcggctgcgcgacctgggcggcatcgtcgtcatcgacttcatcgacatggtc
ctggagtccaaccgggacctggtgctgcggcgtctgctggagtgcctgggccgggaccgc
accaagcaccaggtggccgaggtcacctcgctcggcctggtccagatgacccgcaagcgg
gtcggccagggcctgctggagtcgttctccgagcagtgcgtgcactgcaacggccgcggc
gtgctcgtccacatggaccagccgtcggccggtggcggcaagcgcaagaagaagggcaag
gccggggcgaacggtgcccagccggagcagcccgccgaggccaccaccgagggcgccgcg
gagccggtgtccgcgccggtggccgaggaggaggcgccggagctggagccggtcgcggtg
accgaggcccagctgcagccgtcggtggacggtgccgacgagtggtacggcagccccgcg
gaggccgaggccgccgccaccgggcgtgcccggggccgccgtcgggtgagccggaaggtg
tcggcgccggccggcgcgcccaaggccgccgcggaggccgccgcgatcgtgctgccggcc
gccgagccgaccgccccggtcgcggagccggagcccgccgtggagccggtcgccgaggcg
gtcgaggccgctccggtcgccgagcccgcaccggcccgaccgcgtcgccgcgccacccgt
cgggtgtccgctccggcgggcgcgccggaggtcgccgaggatgccgggacgatcgtcatc
agcgcgccggtgaccgagccggccgcggagccggtcgccgaggcccccgagcagcccgcc
gaggtcgtggagggcgcggaggccgtcgagccggcacccgcggccaagaagaccgtgaag
aaggcggcggcgaagaagacgaccgccaagaaggcggccgcgaagaagaccacggccaag
aagacggcggcgaagaagaccaccgccaagaaggccgcggtcaagaagaccaccgcgaag
aagacgacgacgaagaagaccgcggcgaagaagaccgcggccgcttcggcgccggcctcc
gcggaggactga
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